RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 KCND2Q9NZV8 630 aa16.62■□□□□ 0.25
HERC2-207ENST00000564734 ODF2LQ9ULJ1 636 aa16.62■□□□□ 0.25
HERC2-207ENST00000564734 EVI5O60447 810 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 PLA2G6O60733 806 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 ARP10275 920 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 CCDC174Q6PII3 467 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 VPS36Q86VN1 386 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 KLHL7Q8IXQ5 586 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 NACC1Q96RE7 527 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 CAPS2Q9BXY5 557 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 GOPCQ9HD26 462 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 AGPAT3Q9NRZ7 376 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 C21orf2O43822 256 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 ERVK-9P63128 1117 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 NT5DC3Q86UY8 548 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 TSPYL1Q9H0U9 437 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 BCS1LQ9Y276 419 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 CEP104O60308 925 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 GAS7O60861 476 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 PPP1R37O75864 691 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 HSPA9P38646 679 aaKnown RBP16.61■□□□□ 0.25
HERC2-207ENST00000564734 GALCP54803 685 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 UBXN2AP68543 259 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 CBWD6Q4V339 395 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 CBWD3Q5JTY5 395 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 CBWD5Q5RIA9 395 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 EMC10Q5UCC4 262 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 U2AF1L4Q8WU68 220 aaKnown RBP16.61■□□□□ 0.25
HERC2-207ENST00000564734 LMBR1Q8WVP7 490 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 HES6Q96HZ4 224 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.61■□□□□ 0.251e-6■■■□□ 14.6
HERC2-207ENST00000564734 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
HERC2-207ENST00000564734 RSPH14Q9UHP6 348 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 DNAJC12Q9UKB3 198 aa16.61■□□□□ 0.25
HERC2-207ENST00000564734 NCANO14594 1321 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 TRIM66O15016 1216 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 GUCY2CP25092 1073 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 MAPK7Q13164 816 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 PPP2R5AQ15172 486 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 CFAP58Q5T655 872 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 C1orf131Q8NDD1 294 aaKnown RBP16.6■□□□□ 0.25
HERC2-207ENST00000564734 DEFB129Q9H1M3 183 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 ZBTB21Q9ULJ3 1066 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 MRPL11Q9Y3B7 192 aaKnown RBP16.6■□□□□ 0.25
HERC2-207ENST00000564734 SPDYE2BA6NHP3 402 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 TCP10L2B9ZVM9 353 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 SPDYE6P0CI01 402 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 DRAP1Q14919 205 aaPredicted RBP16.6■□□□□ 0.25
HERC2-207ENST00000564734 SLC9A9Q8IVB4 645 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 RUFY1Q96T51 708 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 WDR11Q9BZH6 1224 aa16.6■□□□□ 0.25
HERC2-207ENST00000564734 CNTNAP1P78357 1384 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 PGRMC1O00264 195 aaKnown RBP16.59■□□□□ 0.25
HERC2-207ENST00000564734 EIF3HO15372 352 aaKnown RBP eCLIP16.59■□□□□ 0.257e-7■■■■□ 21.6
HERC2-207ENST00000564734 PPP1R12BO60237 982 aaPredicted RBP16.59■□□□□ 0.25
HERC2-207ENST00000564734 KRT14P02533 472 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 GUCY2FP51841 1108 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 FAM178BQ8IXR5 827 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 SYCE1Q8N0S2 351 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 DAW1Q8N136 415 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 CHURC1Q8WUH1 139 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 FAM151AQ8WW52 585 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 CNKSR1Q969H4 720 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 ZNF577Q9BSK1 485 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 NOC2LQ9Y3T9 749 aaKnown RBP16.59■□□□□ 0.25
HERC2-207ENST00000564734 PEX26Q7Z412 305 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 BANK1Q8NDB2 785 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 LMO3Q8TAP4 145 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 INTS2Q9H0H0 1204 aaKnown RBP16.59■□□□□ 0.25
HERC2-207ENST00000564734 TMEM253P0C7T8 217 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 LMNB1P20700 586 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 SETQ01105 290 aaPredicted RBP16.59■□□□□ 0.25
HERC2-207ENST00000564734 PPATQ06203 517 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 NLGN2Q8NFZ4 835 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 ZFP91Q96JP5 570 aaPredicted RBP16.59■□□□□ 0.25
HERC2-207ENST00000564734 VCPKMTQ9H867 229 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 EHMT1Q9H9B1 1298 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 ZNF70Q9UC06 446 aaPredicted RBP16.59■□□□□ 0.25
HERC2-207ENST00000564734 DAAM1Q9Y4D1 1078 aa16.59■□□□□ 0.25
HERC2-207ENST00000564734 PTPROQ16827 1216 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 ODR4Q5SWX8 454 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 STXBP4Q6ZWJ1 553 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 HS2ST1Q7LGA3 356 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 GLYCTKQ8IVS8 523 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 TEKT3Q9BXF9 490 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 AP1M1Q9BXS5 423 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 TTC7AQ9ULT0 858 aaPredicted RBP16.58■□□□□ 0.24
HERC2-207ENST00000564734 CCDC188H7C350 402 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 SART1O43290 800 aaKnown RBP16.58■□□□□ 0.24
HERC2-207ENST00000564734 CYP2J2P51589 502 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 GNGT1P63211 74 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 SLC20A2Q08357 652 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 CUL1Q13616 776 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 MYBPC2Q14324 1141 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 TMEM174Q8WUU8 243 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 MXRA8Q9BRK3 442 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 FRMD4BQ9Y2L6 1034 aa16.58■□□□□ 0.24
HERC2-207ENST00000564734 TRIM49P0CI25 452 aa16.57■□□□□ 0.24
HERC2-207ENST00000564734 TRIM49CP0CI26 452 aa16.57■□□□□ 0.24
HERC2-207ENST00000564734 SH2D3CQ8N5H7 860 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms