RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 PTPDC1A2A3K4 754 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 KRT37O76014 449 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 ADCY7P51828 1080 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 BCAR1P56945 870 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 ADCY1Q08828 1119 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 RIN1Q13671 783 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 EPHA7Q15375 998 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 LSM12Q3MHD2 195 aaKnown RBP6.41□□□□□ -1.38
CHD9-212ENST00000564641 AMER2Q8N7J2 671 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 OR5AN1Q8NGI8 311 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 RPGRQ92834 1020 aaKnown RBP6.41□□□□□ -1.38
CHD9-212ENST00000564641 PLEKHG4BQ96PX9 1271 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 SLITRK6Q9H5Y7 841 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 SYNPO2Q9UMS6 1093 aa6.41□□□□□ -1.38
CHD9-212ENST00000564641 A0A1W2PRX2 142 aa6.4□□□□□ -1.38
CHD9-212ENST00000564641 RFPL3O75679 317 aa6.4□□□□□ -1.38
CHD9-212ENST00000564641 ZNF202O95125 648 aa6.4□□□□□ -1.38
CHD9-212ENST00000564641 GAGE13Q4V321 117 aa6.4□□□□□ -1.38
CHD9-212ENST00000564641 BMP8AQ7Z5Y6 402 aa6.4□□□□□ -1.38
CHD9-212ENST00000564641 KIAA1958Q8N8K9 716 aa6.4□□□□□ -1.38
CHD9-212ENST00000564641 IL17DQ8TAD2 202 aa6.4□□□□□ -1.38
CHD9-212ENST00000564641 C16orf92Q96LL3 132 aa6.4□□□□□ -1.38
CHD9-212ENST00000564641 CLUHP3Q96NS8 147 aa6.4□□□□□ -1.38
CHD9-212ENST00000564641 INTS7Q9NVH2 962 aaKnown RBP6.4□□□□□ -1.38
CHD9-212ENST00000564641 B4GALT6Q9UBX8 382 aa6.4□□□□□ -1.38
CHD9-212ENST00000564641 TNPO3Q9Y5L0 923 aaKnown RBP6.4□□□□□ -1.38
CHD9-212ENST00000564641 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
CHD9-212ENST00000564641 CAPN14A8MX76 684 aa6.39□□□□□ -1.39
CHD9-212ENST00000564641 TRAF5O00463 557 aa6.39□□□□□ -1.39
CHD9-212ENST00000564641 PLSCR1O15162 318 aa6.39□□□□□ -1.39
CHD9-212ENST00000564641 RGS3P49796 1198 aa6.39□□□□□ -1.39
CHD9-212ENST00000564641 TGFB2P61812 414 aa6.39□□□□□ -1.39
CHD9-212ENST00000564641 BMS1Q14692 1282 aaKnown RBP6.39□□□□□ -1.39
CHD9-212ENST00000564641 ZZZ3Q8IYH5 903 aa6.39□□□□□ -1.39
CHD9-212ENST00000564641 CACTINQ8WUQ7 758 aaKnown RBP6.39□□□□□ -1.39
CHD9-212ENST00000564641 AGO3Q9H9G7 860 aaKnown RBP6.39□□□□□ -1.39
CHD9-212ENST00000564641 PARPBPQ9NWS1 579 aa6.39□□□□□ -1.39
CHD9-212ENST00000564641 DVL2O14641 736 aa6.38□□□□□ -1.39
CHD9-212ENST00000564641 NARSO43776 548 aaKnown RBP6.38□□□□□ -1.39
CHD9-212ENST00000564641 DNAJC8O75937 253 aaPredicted RBP6.38□□□□□ -1.39
CHD9-212ENST00000564641 ATP2C1P98194 919 aaPredicted RBP6.38□□□□□ -1.39
CHD9-212ENST00000564641 KLF10Q13118 480 aa6.38□□□□□ -1.39
CHD9-212ENST00000564641 FHL2Q14192 279 aa6.38□□□□□ -1.39
CHD9-212ENST00000564641 PIK3R6Q5UE93 754 aa6.38□□□□□ -1.39
CHD9-212ENST00000564641 TIGD7Q6NT04 549 aaPredicted RBP6.38□□□□□ -1.39
CHD9-212ENST00000564641 ZNF662Q6ZS27 426 aa6.38□□□□□ -1.39
CHD9-212ENST00000564641 NKD2Q969F2 451 aaPredicted RBP6.38□□□□□ -1.39
CHD9-212ENST00000564641 TMEM176AQ96HP8 235 aa6.38□□□□□ -1.39
CHD9-212ENST00000564641 DYDC2Q96IM9 177 aa6.38□□□□□ -1.39
CHD9-212ENST00000564641 WDR92Q96MX6 357 aa6.38□□□□□ -1.39
CHD9-212ENST00000564641 TUBGCP5Q96RT8 1024 aa6.38□□□□□ -1.39
CHD9-212ENST00000564641 ORAI3Q9BRQ5 295 aa6.38□□□□□ -1.39
CHD9-212ENST00000564641 TMEM260Q9NX78 707 aa6.38□□□□□ -1.39
CHD9-212ENST00000564641 MAGEC2Q9UBF1 373 aaPredicted RBP6.38□□□□□ -1.39
CHD9-212ENST00000564641 WDR33Q9C0J8 1336 aaKnown RBP6.37□□□□□ -1.39
CHD9-212ENST00000564641 GOLGA8BA8MQT2 603 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 CBX4O00257 560 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 DAPK3O43293 454 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 PEX11BO96011 259 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 TCIRG1Q13488 830 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 SQSTM1Q13501 440 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 TUBA3CQ13748 450 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 PRAMEF9Q5VWM5 478 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 TUBA3EQ6PEY2 450 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 KIF18BQ86Y91 864 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 TMPRSS6Q8IU80 811 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 PHYKPLQ8IUZ5 450 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 SH3TC2Q8TF17 1288 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 MIEF2Q96C03 454 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 ZSWIM4Q9H7M6 989 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 POLR3BQ9NW08 1133 aaPredicted RBP6.37□□□□□ -1.39
CHD9-212ENST00000564641 SPO11Q9Y5K1 396 aa6.37□□□□□ -1.39
CHD9-212ENST00000564641 RBM8AQ9Y5S9 174 aaKnown RBP6.37□□□□□ -1.39
CHD9-212ENST00000564641 JUNP05412 331 aaKnown RBP6.36□□□□□ -1.39
CHD9-212ENST00000564641 C1SP09871 688 aa6.36□□□□□ -1.39
CHD9-212ENST00000564641 JMJD7P0C870 316 aa6.36□□□□□ -1.39
CHD9-212ENST00000564641 MAKP20794 623 aa6.36□□□□□ -1.39
CHD9-212ENST00000564641 BPIFB4P59827 614 aa6.36□□□□□ -1.39
CHD9-212ENST00000564641 CRHR2Q13324 411 aa6.36□□□□□ -1.39
CHD9-212ENST00000564641 MAN2A1Q16706 1144 aa6.36□□□□□ -1.39
CHD9-212ENST00000564641 CFAP100Q494V2 611 aa6.36□□□□□ -1.39
CHD9-212ENST00000564641 ANKRD53Q8N9V6 530 aa6.36□□□□□ -1.39
CHD9-212ENST00000564641 PLA2G15Q8NCC3 412 aa6.36□□□□□ -1.39
CHD9-212ENST00000564641 HAPLN2Q9GZV7 340 aa6.36□□□□□ -1.39
CHD9-212ENST00000564641 ZKSCAN5Q9Y2L8 839 aa6.36□□□□□ -1.39
CHD9-212ENST00000564641 C2orf78A6NCI8 922 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 VSIG10L2P0DP72 767 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 ANTXR2P58335 489 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 DPTQ07507 201 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 SAFB2Q14151 953 aaKnown RBP eCLIP6.35□□□□□ -1.39
CHD9-212ENST00000564641 ZNF460Q14592 562 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 TCEA2Q15560 299 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 CDCA2Q69YH5 1023 aaPredicted RBP6.35□□□□□ -1.39
CHD9-212ENST00000564641 MFSD5Q6N075 450 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 FAM111BQ6SJ93 734 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 CLEC14AQ86T13 490 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 GSPT2Q8IYD1 628 aaKnown RBP6.35□□□□□ -1.39
CHD9-212ENST00000564641 C7orf31Q8N865 590 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 MENTQ9BUN1 341 aa6.35□□□□□ -1.39
CHD9-212ENST00000564641 C14orf93Q9H972 538 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms