RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 GPR182O15218 404 aa19.28■□□□□ 0.68
USB1-209ENST00000564387 ASAP2O43150 1006 aa19.28■□□□□ 0.68
USB1-209ENST00000564387 RPS6KA5O75582 802 aa19.28■□□□□ 0.68
USB1-209ENST00000564387 GJB5O95377 273 aa19.28■□□□□ 0.68
USB1-209ENST00000564387 CDC25AP30304 524 aa19.28■□□□□ 0.68
USB1-209ENST00000564387 PAK2Q13177 524 aa19.28■□□□□ 0.68
USB1-209ENST00000564387 ODR4Q5SWX8 454 aa19.28■□□□□ 0.68
USB1-209ENST00000564387 FAM228AQ86W67 206 aa19.28■□□□□ 0.68
USB1-209ENST00000564387 PRPF31Q8WWY3 499 aaKnown RBP19.28■□□□□ 0.68
USB1-209ENST00000564387 PSPC1Q8WXF1 523 aaKnown RBP19.28■□□□□ 0.68
USB1-209ENST00000564387 USP28Q96RU2 1077 aa19.28■□□□□ 0.68
USB1-209ENST00000564387 MTRQ99707 1265 aa19.28■□□□□ 0.68
USB1-209ENST00000564387 TSPYL2Q9H2G4 693 aaPredicted RBP19.28■□□□□ 0.68
USB1-209ENST00000564387 AMHP03971 560 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 ARL2P36404 184 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 LONP1P36776 959 aaKnown RBP19.27■□□□□ 0.68
USB1-209ENST00000564387 NASPP49321 788 aaPredicted RBP19.27■□□□□ 0.68
USB1-209ENST00000564387 POU5F1BQ06416 359 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 PKP1Q13835 747 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 SLC39A14Q15043 492 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 TMEM143Q96AN5 459 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 PPP1R16BQ96T49 567 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 ATP6V0A4Q9HBG4 840 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 IFT122Q9HBG6 1241 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 FBXO2Q9UK22 296 aaPredicted RBP19.27■□□□□ 0.68
USB1-209ENST00000564387 ST3GAL5Q9UNP4 418 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 KIAA1024Q9UPX6 916 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 GINS2Q9Y248 185 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 YBX2Q9Y2T7 364 aaKnown RBP19.27■□□□□ 0.68
USB1-209ENST00000564387 COL4A3BPQ9Y5P4 624 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 CHD7Q9P2D1 2997 aa19.27■□□□□ 0.68
USB1-209ENST00000564387 MYH15Q9Y2K3 1946 aa19.27■□□□□ 0.67
USB1-209ENST00000564387 TTC3P53804 2025 aa19.27■□□□□ 0.67
USB1-209ENST00000564387 A0A087WZ62 844 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 F13A1P00488 732 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 CYP11B2P19099 503 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 RABGGTBP53611 331 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 HTRA4P83105 476 aaPredicted RBP19.26■□□□□ 0.67
USB1-209ENST00000564387 GRIN1Q05586 938 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 LAMTOR4Q0VGL1 99 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 DSC3Q14574 896 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 MXD4Q14582 209 aaPredicted RBP19.26■□□□□ 0.67
USB1-209ENST00000564387 IFNLR1Q8IU57 520 aaPredicted RBP19.26■□□□□ 0.67
USB1-209ENST00000564387 RHPN2Q8IUC4 686 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 KSR1Q8IVT5 923 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 TIFAQ96CG3 184 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 PNMA5Q96PV4 448 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 FDXACB1Q9BRP7 624 aaPredicted RBP19.26■□□□□ 0.67
USB1-209ENST00000564387 GCOM2Q9BZD3 368 aaPredicted RBP19.26■□□□□ 0.67
USB1-209ENST00000564387 TTYH1Q9H313 450 aaPredicted RBP19.26■□□□□ 0.67
USB1-209ENST00000564387 DDX19AQ9NUU7 478 aaKnown RBP19.26■□□□□ 0.67
USB1-209ENST00000564387 MSRAQ9UJ68 235 aa19.26■□□□□ 0.67
USB1-209ENST00000564387 SRPRBQ9Y5M8 271 aaKnown RBP19.26■□□□□ 0.67
USB1-209ENST00000564387 COL4A6Q14031 1691 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 MGEA5O60502 916 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 EYA4O95677 639 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 GRB10Q13322 594 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 BECN1Q14457 450 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 TMEM119Q4V9L6 283 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 PADI6Q6TGC4 694 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 KCNK18Q7Z418 384 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 SPRYD3Q8NCJ5 442 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 MCPH1Q8NEM0 835 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 NLRP7Q8WX94 980 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 RAD9AQ99638 391 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 INO80BQ9C086 356 aaPredicted RBP19.25■□□□□ 0.67
USB1-209ENST00000564387 NT5C3AQ9H0P0 336 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 SEMA6BQ9H3T3 888 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 RGS18Q9NS28 235 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 DNM3Q9UQ16 869 aa19.25■□□□□ 0.67
USB1-209ENST00000564387 BRD1O95696 1058 aa19.24■□□□□ 0.67
USB1-209ENST00000564387 MYOGP15173 224 aa19.24■□□□□ 0.67
USB1-209ENST00000564387 FAM189BP81408 668 aa19.24■□□□□ 0.67
USB1-209ENST00000564387 NFX1Q12986 1120 aaKnown RBP19.24■□□□□ 0.67
USB1-209ENST00000564387 ATL3Q6DD88 541 aa19.24■□□□□ 0.67
USB1-209ENST00000564387 TMCO2Q7Z6W1 182 aaPredicted RBP19.24■□□□□ 0.67
USB1-209ENST00000564387 MYOCDQ8IZQ8 938 aa19.24■□□□□ 0.67
USB1-209ENST00000564387 LINC00301Q8NCQ3 95 aa19.24■□□□□ 0.67
USB1-209ENST00000564387 SP7Q8TDD2 431 aaPredicted RBP19.24■□□□□ 0.67
USB1-209ENST00000564387 ZNF668Q96K58 619 aaPredicted RBP19.24■□□□□ 0.67
USB1-209ENST00000564387 NFKBIZQ9BYH8 718 aa19.24■□□□□ 0.67
USB1-209ENST00000564387 CCSER1Q9C0I3 900 aa19.24■□□□□ 0.67
USB1-209ENST00000564387 BHMT2Q9H2M3 363 aa19.24■□□□□ 0.67
USB1-209ENST00000564387 MTMR10Q9NXD2 777 aa19.24■□□□□ 0.67
USB1-209ENST00000564387 ZDHHC9Q9Y397 364 aa19.24■□□□□ 0.67
USB1-209ENST00000564387 ARHGEF35A5YM69 484 aa19.23■□□□□ 0.67
USB1-209ENST00000564387 C9IYK1 514 aa19.23■□□□□ 0.67
USB1-209ENST00000564387 E9PMD0 336 aa19.23■□□□□ 0.67
USB1-209ENST00000564387 USO1O60763 962 aaKnown RBP19.23■□□□□ 0.67
USB1-209ENST00000564387 GLRA2P23416 452 aa19.23■□□□□ 0.67
USB1-209ENST00000564387 ZNF697Q5TEC3 545 aa19.23■□□□□ 0.67
USB1-209ENST00000564387 SRGAP1Q7Z6B7 1085 aa19.23■□□□□ 0.67
USB1-209ENST00000564387 CABP7Q86V35 215 aa19.23■□□□□ 0.67
USB1-209ENST00000564387 DEFB123Q8N688 67 aa19.23■□□□□ 0.67
USB1-209ENST00000564387 ASAP3Q8TDY4 903 aa19.23■□□□□ 0.67
USB1-209ENST00000564387 CCDC43Q96MW1 224 aaKnown RBP19.23■□□□□ 0.67
USB1-209ENST00000564387 ZNF396Q96N95 335 aaPredicted RBP19.23■□□□□ 0.67
USB1-209ENST00000564387 RC3H2Q9HBD1 1191 aaKnown RBP19.23■□□□□ 0.67
USB1-209ENST00000564387 BMP2KQ9NSY1 1161 aaPredicted RBP19.23■□□□□ 0.67
USB1-209ENST00000564387 INSL6Q9Y581 213 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms