RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 ZNF277Q9NRM2 450 aaPredicted RBP7.95□□□□□ -1.14
AP000842.3-201ENST00000564354 SPATA6Q9NWH7 488 aaPredicted RBP7.95□□□□□ -1.14
AP000842.3-201ENST00000564354 NTMQ9P121 344 aa7.95□□□□□ -1.14
AP000842.3-201ENST00000564354 LRP2BPQ9P2M1 347 aa7.95□□□□□ -1.14
AP000842.3-201ENST00000564354 WDR33Q9C0J8 1336 aaKnown RBP7.95□□□□□ -1.14
AP000842.3-201ENST00000564354 OVOL3O00110 214 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 PLATP00750 562 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 A1BGP04217 495 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 THBDP07204 575 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 HSPA8P11142 646 aaKnown RBP7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 IL6STP40189 918 aaPredicted RBP7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 CACNB2Q08289 660 aaPredicted RBP7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 LARP1BQ659C4 914 aaKnown RBP7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 MBLAC2Q68D91 279 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 VPS37DQ86XT2 251 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 TEX2Q8IWB9 1127 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 CPA5Q8WXQ8 436 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 ZBTB8AQ96BR9 441 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 DDX11Q96FC9 970 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 ZNF496Q96IT1 587 aaPredicted RBP7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 NOX5Q96PH1 765 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 MMP19Q99542 508 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 AP5M1Q9H0R1 490 aa7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 COL11A2P13942 1736 aaPredicted RBP7.94□□□□□ -1.14
AP000842.3-201ENST00000564354 RASSF10A6NK89 507 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 C22orf46C9J442 243 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 SMAD7O15105 426 aaKnown RBP7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 DIAPH1O60610 1272 aaKnown RBP7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 SSBP05455 408 aaKnown RBP eCLIP7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 NPR1P16066 1061 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 ECE1P42892 770 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 ZNF143P52747 638 aaPredicted RBP7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 SMAD4Q13485 552 aaKnown RBP7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 CNGB1Q14028 1251 aaPredicted RBP7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 SV2CQ496J9 727 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 ZNF790Q6PG37 636 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 TRIM59Q8IWR1 403 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 RTKN2Q8IZC4 609 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 JDP2Q8WYK2 163 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 DPF3Q92784 378 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 LOXL4Q96JB6 756 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 CAPN10Q9HC96 672 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 CYP26B1Q9NR63 512 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 ZNF652Q9Y2D9 606 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 RNF123Q5XPI4 1314 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 ZNF541Q9H0D2 1346 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 HEG1Q9ULI3 1381 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 MRC1P22897 1456 aa7.93□□□□□ -1.14
AP000842.3-201ENST00000564354 U2SURPO15042 1029 aaKnown RBP7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 CAMTA2O94983 1202 aa7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 HSPA5P11021 654 aaKnown RBP7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 ATF4P18848 351 aaPredicted RBP7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 IARSP41252 1262 aaKnown RBP7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 PIP4K2AP48426 406 aaPredicted RBP7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 RBM10P98175 930 aaKnown RBP7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 TBC1D10BQ4KMP7 808 aaPredicted RBP7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 C6orf15Q6UXA7 325 aaPredicted RBP7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 TTLL7Q6ZT98 887 aa7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 DCP2Q8IU60 420 aaKnown RBP7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 SYNE4Q8N205 404 aa7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 PLEKHO2Q8TD55 490 aa7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 SCAND2PQ9GZW5 306 aaPredicted RBP7.92□□□□□ -1.14
AP000842.3-201ENST00000564354 SMARCA5O60264 1052 aaPredicted RBP7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 CYP2C8P10632 490 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 ALDH1B1P30837 517 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 ECI1P42126 302 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 INF2Q27J81 1249 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 OLFM4Q6UX06 510 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 GPC2Q8N158 579 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 ADAMTS17Q8TE56 1095 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 BTN2A2Q8WVV5 523 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 CAPNS2Q96L46 248 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 GPR101Q96P66 508 aaPredicted RBP7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 NKX2-4Q9H2Z4 354 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 DDX21Q9NR30 783 aaKnown RBP eCLIP7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 ACTR10Q9NZ32 417 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 NIP7Q9Y221 180 aaKnown RBP eCLIP7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 SCN7AQ01118 1682 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 UBR2Q8IWV8 1755 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 ARFGEF2Q9Y6D5 1785 aa7.91□□□□□ -1.14
AP000842.3-201ENST00000564354 IGSF3O75054 1194 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 C6P13671 934 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 HMGA2P52926 109 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 RPL11P62913 178 aaKnown RBP7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 IQCEQ6IPM2 695 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 CYP4F22Q6NT55 531 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 CLEC4GQ6UXB4 293 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 CD300LDQ6UXZ3 194 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 ETV3LQ6ZN32 361 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 FAM178BQ8IXR5 827 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 IL17REQ8NFR9 667 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 FRS2Q8WU20 508 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 MRGPRX3Q96LB0 322 aa7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 SSBP3Q9BWW4 388 aaPredicted RBP7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 TIMM13Q9Y5L4 95 aaPredicted RBP7.9□□□□□ -1.14
AP000842.3-201ENST00000564354 FZD9O00144 591 aa7.89□□□□□ -1.15
AP000842.3-201ENST00000564354 TCERG1O14776 1098 aaKnown RBP7.89□□□□□ -1.15
AP000842.3-201ENST00000564354 KCNQ3O43525 872 aa7.89□□□□□ -1.15
AP000842.3-201ENST00000564354 DDAH1O94760 285 aa7.89□□□□□ -1.15
AP000842.3-201ENST00000564354 SNRPB2P08579 225 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms