RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 TMEM117Q9H0C3 514 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 RNF19AQ9NV58 838 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 TYW1Q9NV66 732 aaKnown RBP18.84■□□□□ 0.61
CCNF-203ENST00000564236 KIAA1671Q9BY89 1806 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 LOXHD1Q8IVV2 1947 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 FSD2A1L4K1 749 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 PFKFB2O60825 505 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 GCFC2P16383 781 aaKnown RBP18.83■□□□□ 0.6
CCNF-203ENST00000564236 LAG3P18627 525 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 PLCB3Q01970 1234 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 COASYQ13057 564 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 PPP2R5CQ13362 524 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 PDE12Q6L8Q7 609 aaKnown RBP18.83■□□□□ 0.6
CCNF-203ENST00000564236 TRMT1LQ7Z2T5 733 aaKnown RBP18.83■□□□□ 0.6
CCNF-203ENST00000564236 ADGRD2Q7Z7M1 963 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 COLGALT1Q8NBJ5 622 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 RSPH1Q8WYR4 309 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 FAM20AQ96MK3 541 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 CASD1Q96PB1 797 aa18.83■□□□□ 0.6
CCNF-203ENST00000564236 LARP6Q9BRS8 491 aaKnown RBP18.83■□□□□ 0.6
CCNF-203ENST00000564236 DDX25Q9UHL0 483 aaKnown RBP18.83■□□□□ 0.6
CCNF-203ENST00000564236 A0A0U1RQF3 1178 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 FSCN2O14926 492 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 LINC01565O15544 149 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 SLC37A4O43826 429 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 FGF18O76093 207 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 FGFR1P11362 822 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 ALADP13716 330 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 ZSCAN20P17040 1043 aaPredicted RBP18.82■□□□□ 0.6
CCNF-203ENST00000564236 STK3Q13188 491 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 ZNF598Q86UK7 904 aaKnown RBP18.82■□□□□ 0.6
CCNF-203ENST00000564236 ECHDC2Q86YB7 292 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 SMRP1Q8NCR6 262 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 CDCA3Q99618 268 aaPredicted RBP18.82■□□□□ 0.6
CCNF-203ENST00000564236 CHST12Q9NRB3 414 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 CLEC1BQ9P126 229 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 CD207Q9UJ71 328 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 VAV3Q9UKW4 847 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 TPCN1Q9ULQ1 816 aa18.82■□□□□ 0.6
CCNF-203ENST00000564236 MYH9P35579 1960 aaKnown RBP18.82■□□□□ 0.6
CCNF-203ENST00000564236 MYO7AQ13402 2215 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 TBX3O15119 743 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 MAFO75444 373 aaPredicted RBP18.81■□□□□ 0.6
CCNF-203ENST00000564236 GLP2RO95838 553 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 EOMESO95936 686 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 XBP1P17861 261 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 PSMC5P62195 406 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 DRP2Q13474 957 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 INF2Q27J81 1249 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 LRRC55Q6ZSA7 311 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 EP400NLQ6ZTU2 488 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 ANO5Q75V66 913 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 ZNF410Q86VK4 478 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 LRRC43Q8N309 656 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 POP1Q99575 1024 aaKnown RBP18.81■□□□□ 0.6
CCNF-203ENST00000564236 SLKQ9H2G2 1235 aaPredicted RBP18.81■□□□□ 0.6
CCNF-203ENST00000564236 TLR9Q9NR96 1032 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 RAPGEFL1Q9UHV5 662 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 KCNJ14Q9UNX9 436 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 PPME1Q9Y570 386 aa18.81■□□□□ 0.6
CCNF-203ENST00000564236 FNDC1Q4ZHG4 1894 aaPredicted RBP18.81■□□□□ 0.6
CCNF-203ENST00000564236 EVPLQ92817 2033 aa18.8■□□□□ 0.6
CCNF-203ENST00000564236 PRR33A8MZF0 331 aa18.8■□□□□ 0.6
CCNF-203ENST00000564236 CTDNEP1O95476 244 aa18.8■□□□□ 0.6
CCNF-203ENST00000564236 SSTR3P32745 418 aaPredicted RBP18.8■□□□□ 0.6
CCNF-203ENST00000564236 KCNC3Q14003 757 aa18.8■□□□□ 0.6
CCNF-203ENST00000564236 ANKRD1Q15327 319 aa18.8■□□□□ 0.6
CCNF-203ENST00000564236 ERICH6BQ5W0A0 696 aa18.8■□□□□ 0.6
CCNF-203ENST00000564236 NEK8Q86SG6 692 aa18.8■□□□□ 0.6
CCNF-203ENST00000564236 NAP1L4Q99733 375 aaKnown RBP18.8■□□□□ 0.6
CCNF-203ENST00000564236 DACT1Q9NYF0 836 aa18.8■□□□□ 0.6
CCNF-203ENST00000564236 HCSTQ9UBK5 93 aa18.8■□□□□ 0.6
CCNF-203ENST00000564236 SEPT9Q9UHD8 586 aaPredicted RBP18.8■□□□□ 0.6
CCNF-203ENST00000564236 CCDC194A0A1B0GVG4 234 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 EML1O00423 815 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 DCXO43602 365 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 ATF7P17544 494 aaPredicted RBP18.79■□□□□ 0.6
CCNF-203ENST00000564236 PLA2G5P39877 138 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 NRIP1P48552 1158 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 NDUFV1P49821 464 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 DNM2P50570 870 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 LETM2Q2VYF4 491 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 MTERF2Q49AM1 385 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 CLLU1OSQ5K130 101 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 TMEM184AQ6ZMB5 413 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 NLRP7Q8WX94 980 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 MRPS27Q92552 414 aaKnown RBP18.79■□□□□ 0.6
CCNF-203ENST00000564236 JPH2Q9BR39 696 aaPredicted RBP18.79■□□□□ 0.6
CCNF-203ENST00000564236 GCOM2Q9BZD3 368 aaPredicted RBP18.79■□□□□ 0.6
CCNF-203ENST00000564236 IGFLR1Q9H665 355 aa18.79■□□□□ 0.6
CCNF-203ENST00000564236 WDR81Q562E7 1941 aa18.78■□□□□ 0.6
CCNF-203ENST00000564236 TMEM150BA6NC51 233 aa18.78■□□□□ 0.6
CCNF-203ENST00000564236 DKC1O60832 514 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCNF-203ENST00000564236 P4HBP07237 508 aaKnown RBP18.78■□□□□ 0.6
CCNF-203ENST00000564236 PPM1AP35813 382 aa18.78■□□□□ 0.6
CCNF-203ENST00000564236 QARSP47897 775 aaKnown RBP18.78■□□□□ 0.6
CCNF-203ENST00000564236 ERVFC1P60507 584 aa18.78■□□□□ 0.6
CCNF-203ENST00000564236 DUSP6Q16828 381 aa18.78■□□□□ 0.6
CCNF-203ENST00000564236 SPOUT1Q5T280 376 aaKnown RBP18.78■□□□□ 0.6
CCNF-203ENST00000564236 KCNT2Q6UVM3 1135 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms