RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 KLHDC7AQ5VTJ3 777 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 MOB2Q70IA6 237 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 HEATR3Q7Z4Q2 680 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 CPLX4Q7Z7G2 160 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 ADGRF4Q8IZF3 695 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 SHISA4Q96DD7 197 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 DHTKD1Q96HY7 919 aaPredicted RBP12.04□□□□□ -0.48
TCF4-222ENST00000564228 TRIM47Q96LD4 638 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 MTRQ99707 1265 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 TUBGCP2Q9BSJ2 902 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 RIOX1Q9H6W3 641 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 ZNF408Q9H9D4 720 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 POLD4Q9HCU8 107 aa12.04□□□□□ -0.48
TCF4-222ENST00000564228 CCND1P24385 295 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 LMNB2Q03252 620 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 ZNF844Q08AG5 666 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 SPP2Q13103 211 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 DGKZQ13574 1117 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 MTMR2Q13614 643 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 VGLL4Q14135 290 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 TTI2Q6NXR4 508 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 KIRREL3Q8IZU9 778 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 TBC1D31Q96DN5 1066 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 CHMP6Q96FZ7 201 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 PHF20Q9BVI0 1012 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 SMARCAL1Q9NZC9 954 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 EHD2Q9NZN4 543 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 GDAQ9Y2T3 454 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 ZHX2Q9Y6X8 837 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 A6NHS1 94 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 TRAF5O00463 557 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 CXCR5P32302 372 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 PPP1R2P41236 205 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 IREB2P48200 963 aaKnown RBP12.03□□□□□ -0.48
TCF4-222ENST00000564228 CCNG1P51959 295 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 NLRP5P59047 1200 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 IFI16Q16666 785 aaKnown RBP12.03□□□□□ -0.48
TCF4-222ENST00000564228 SLC5A9Q2M3M2 681 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 SPDYCQ5MJ68 293 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 TTC38Q5R3I4 469 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 MFN1Q8IWA4 741 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 THOC1Q96FV9 657 aaKnown RBP12.03□□□□□ -0.48
TCF4-222ENST00000564228 CALR3Q96L12 384 aaKnown RBP12.03□□□□□ -0.48
TCF4-222ENST00000564228 ZNF570Q96NI8 536 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 FAM129AQ9BZQ8 928 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 JMJD4Q9H9V9 463 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 AS3MTQ9HBK9 375 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 KCNMB3Q9NPA1 279 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 SLC5A4Q9NY91 659 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 ARHGAP20Q9P2F6 1191 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 CSADQ9Y600 493 aa12.03□□□□□ -0.48
TCF4-222ENST00000564228 PARP14Q460N5 1801 aa12.02□□□□□ -0.48
TCF4-222ENST00000564228 GOLGA6L10A0A0M3HER8 536 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 BICDL2A1A5D9 508 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 TRIM49BA6NDI0 452 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 ABLIM1O14639 778 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 MAGEA1P43355 309 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 TRAPPC10P48553 1259 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 RAB27AP51159 221 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 RPS6KA3P51812 740 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 UAP1Q16222 522 aaPredicted RBP12.02□□□□□ -0.49
TCF4-222ENST00000564228 NOL9Q5SY16 702 aaKnown RBP12.02□□□□□ -0.49
TCF4-222ENST00000564228 FKBP15Q5T1M5 1219 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 ERMARDQ5T6L9 678 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 TEX9Q8N6V9 391 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 ZNF280CQ8ND82 737 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 PARD3BQ8TEW8 1205 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.49
TCF4-222ENST00000564228 TMEM59LQ9UK28 342 aa12.02□□□□□ -0.49
TCF4-222ENST00000564228 SSU72P8A0A1W2PR75 194 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 ESYT3A0FGR9 886 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 ZSCAN5CA6NGD5 496 aaPredicted RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 RBAK-RBAKDNI3L0D1 243 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 NCK2O43639 380 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 RHOBTB3O94955 611 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 NEFHP12036 1026 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 EIF4A3P38919 411 aaKnown RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 STAT2P52630 851 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 NAPAP54920 295 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 SNAP25P60880 206 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 TYW1BQ6NUM6 668 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 GIMAP8Q8ND71 665 aaPredicted RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 SPDYE1Q8NFV5 336 aaPredicted RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 STAMQ92783 540 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 TNFRSF25Q93038 417 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 XPO6Q96QU8 1125 aaKnown RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 KRT12Q99456 494 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 EDEM3Q9BZQ6 932 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 KIAA1683Q9H0B3 1180 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 BARHL2Q9NY43 387 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 CNOT8Q9UFF9 292 aaKnown RBP12.01□□□□□ -0.49
TCF4-222ENST00000564228 SNCAIPQ9Y6H5 919 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 PNMA6FA0A0J9YX94 578 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 STXBP3O00186 592 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 AKR1B10O60218 316 aa12.01□□□□□ -0.49
TCF4-222ENST00000564228 FERP16591 822 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms