RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SMIM10L2BP0DMW5 78 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 ERCC5P28715 1186 aaPredicted RBP14.16□□□□□ -0.14
CLK3-214ENST00000564096 CHMP4BP1P59074 171 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 IGBP1P78318 339 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 PAK1Q13153 545 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 MAPK7Q13164 816 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 IER5Q5VY09 327 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 C11orf57Q6ZUT1 292 aaPredicted RBP14.16□□□□□ -0.14
CLK3-214ENST00000564096 MYOCDQ8IZQ8 938 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 GUF1Q8N442 669 aaKnown RBP14.16□□□□□ -0.14
CLK3-214ENST00000564096 KLHDC9Q8NEP7 349 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 KAT2BQ92831 832 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 TSEN34Q9BSV6 310 aaKnown RBP14.16□□□□□ -0.14
CLK3-214ENST00000564096 RNPEPQ9H4A4 650 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 SLC39A2Q9NP94 309 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 XPNPEP1Q9NQW7 623 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 CTNND2Q9UQB3 1225 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 GDAQ9Y2T3 454 aa14.16□□□□□ -0.14
CLK3-214ENST00000564096 C17orf102A2RUQ5 167 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 SMTNL1A8MU46 457 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 ZBTB42B2RXF5 422 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 GOLGA6L19H0YKK7 550 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 SLC34A2O95436 690 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 RPLP2P05387 115 aaKnown RBP14.15□□□□□ -0.14
CLK3-214ENST00000564096 ASGR1P07306 291 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 BMP6P22004 513 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 MYL5Q02045 173 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 STK4Q13043 487 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 TFDP1Q14186 410 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 MXD4Q14582 209 aaPredicted RBP14.15□□□□□ -0.14
CLK3-214ENST00000564096 GSE1Q14687 1217 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 LRRC41Q15345 812 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 KLHL10Q6JEL2 608 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 CXCL17Q6UXB2 119 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 SMYD4Q8IYR2 804 aaPredicted RBP14.15□□□□□ -0.14
CLK3-214ENST00000564096 DAW1Q8N136 415 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 ADSSL1Q8N142 457 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 METTL13Q8N6R0 699 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 KIAA0895Q8NCT3 520 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 LMBR1Q8WVP7 490 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 SPIRE2Q8WWL2 714 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 HVCN1Q96D96 273 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 DHTKD1Q96HY7 919 aaPredicted RBP14.15□□□□□ -0.14
CLK3-214ENST00000564096 CEP89Q96ST8 783 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 TSG101Q99816 390 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 RNF208Q9H0X6 261 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 UNC93B1Q9H1C4 597 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 GPRC5CQ9NQ84 441 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 PAK6Q9NQU5 681 aaPredicted RBP14.15□□□□□ -0.14
CLK3-214ENST00000564096 PCDHB13Q9Y5F0 798 aa14.15□□□□□ -0.14
CLK3-214ENST00000564096 MYH9P35579 1960 aaKnown RBP14.14□□□□□ -0.15
CLK3-214ENST00000564096 IGKV6-21A0A0C4DH24 114 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 CCDC169A6NNP5 214 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 CCL5P13501 91 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 NAMPTP43490 491 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 PEX3P56589 373 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 KCNA10Q16322 511 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 MTHFD1LQ6UB35 978 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 DEPTORQ8TB45 409 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 TRAPPC12Q8WVT3 735 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 TMEM143Q96AN5 459 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 GLT1D1Q96MS3 346 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 SUGCTQ9HAC7 445 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 KMT5AQ9NQR1 393 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 PDLIM7Q9NR12 457 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 TBC1D7Q9P0N9 293 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 RWDD2AQ9UIY3 292 aa14.14□□□□□ -0.15
CLK3-214ENST00000564096 DNM1LO00429 736 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 IKBKBO14920 756 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 ASAP2O43150 1006 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 KLRC1P26715 233 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 ARL2P36404 184 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 PRCPP42785 496 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 ACLYP53396 1101 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 NCKAP1LP55160 1127 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 LRRC63Q05C16 580 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 TPD52L1Q16890 204 aaPredicted RBP14.13□□□□□ -0.15
CLK3-214ENST00000564096 BMT2Q1RMZ1 405 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 FAM47CQ5HY64 1035 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 LHX8Q68G74 356 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 CCSAPQ6IQ19 270 aaPredicted RBP14.13□□□□□ -0.15
CLK3-214ENST00000564096 EFCAB12Q6NXP0 572 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 TAF2Q6P1X5 1199 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 NFRKBQ6P4R8 1299 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 ZBTB8OSQ8IWT0 167 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 LRRC71Q8N4P6 559 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 AOPEPQ8N6M6 819 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 RNF214Q8ND24 703 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 NELFBQ8WX92 580 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 HPS3Q969F9 1004 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 ARMC5Q96C12 935 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 SEZ6LQ9BYH1 1024 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 C2orf40Q9H1Z8 148 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 ST6GALNAC4Q9H4F1 302 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 TMEM206Q9H813 350 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 CBX8Q9HC52 389 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 SUCLA2Q9P2R7 463 aaPredicted RBP14.13□□□□□ -0.15
CLK3-214ENST00000564096 EXOC7Q9UPT5 735 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 AKT3Q9Y243 479 aa14.13□□□□□ -0.15
CLK3-214ENST00000564096 PCDHA2Q9Y5H9 948 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms