RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 C1QTNF1Q9BXJ1 281 aa28.27■■■□□ 2.12
SPG7-208ENST00000563783 PCDHB12Q9Y5F1 795 aa28.27■■■□□ 2.12
SPG7-208ENST00000563783 GRXCR2A6NFK2 248 aa28.26■■■□□ 2.11
SPG7-208ENST00000563783 MAFO75444 373 aaPredicted RBP28.26■■■□□ 2.11
SPG7-208ENST00000563783 QARSP47897 775 aaKnown RBP28.26■■■□□ 2.11
SPG7-208ENST00000563783 CAMK1Q14012 370 aa28.26■■■□□ 2.11
SPG7-208ENST00000563783 ME3Q16798 604 aa28.26■■■□□ 2.11
SPG7-208ENST00000563783 PAN2Q504Q3 1202 aaKnown RBP28.26■■■□□ 2.11
SPG7-208ENST00000563783 SLFN12Q8IYM2 578 aa28.26■■■□□ 2.11
SPG7-208ENST00000563783 KLHL23Q8NBE8 558 aa28.26■■■□□ 2.11
SPG7-208ENST00000563783 PPP1R16BQ96T49 567 aa28.26■■■□□ 2.11
SPG7-208ENST00000563783 TMEM117Q9H0C3 514 aa28.26■■■□□ 2.11
SPG7-208ENST00000563783 FSD2A1L4K1 749 aa28.25■■■□□ 2.11
SPG7-208ENST00000563783 P4HBP07237 508 aaKnown RBP28.25■■■□□ 2.11
SPG7-208ENST00000563783 FDPSP14324 419 aaKnown RBP28.25■■■□□ 2.11
SPG7-208ENST00000563783 KRT2P35908 639 aa28.25■■■□□ 2.11
SPG7-208ENST00000563783 PTCRAQ6ISU1 281 aaPredicted RBP28.25■■■□□ 2.11
SPG7-208ENST00000563783 PIK3AP1Q6ZUJ8 805 aa28.25■■■□□ 2.11
SPG7-208ENST00000563783 FAM178BQ8IXR5 827 aa28.25■■■□□ 2.11
SPG7-208ENST00000563783 TRAIPQ9BWF2 469 aa28.25■■■□□ 2.11
SPG7-208ENST00000563783 GCOM2Q9BZD3 368 aaPredicted RBP28.25■■■□□ 2.11
SPG7-208ENST00000563783 ALG13Q9NP73 1137 aaKnown RBP28.25■■■□□ 2.11
SPG7-208ENST00000563783 CHST12Q9NRB3 414 aa28.25■■■□□ 2.11
SPG7-208ENST00000563783 DACT1Q9NYF0 836 aa28.25■■■□□ 2.11
SPG7-208ENST00000563783 ARID2Q68CP9 1835 aa28.25■■■□□ 2.11
SPG7-208ENST00000563783 CCNT1O60563 726 aaKnown RBP28.24■■■□□ 2.11
SPG7-208ENST00000563783 MTERF2Q49AM1 385 aa28.24■■■□□ 2.11
SPG7-208ENST00000563783 ANO5Q75V66 913 aa28.24■■■□□ 2.11
SPG7-208ENST00000563783 OXER1Q8TDS5 423 aa28.24■■■□□ 2.11
SPG7-208ENST00000563783 HAS1Q92839 578 aa28.24■■■□□ 2.11
SPG7-208ENST00000563783 TNFRSF25Q93038 417 aa28.24■■■□□ 2.11
SPG7-208ENST00000563783 INO80BQ9C086 356 aaPredicted RBP28.24■■■□□ 2.11
SPG7-208ENST00000563783 PRKAG3Q9UGI9 489 aa28.24■■■□□ 2.11
SPG7-208ENST00000563783 TBKBP1A7MCY6 615 aa28.23■■■□□ 2.11
SPG7-208ENST00000563783 EML1O00423 815 aa28.23■■■□□ 2.11
SPG7-208ENST00000563783 EOMESO95936 686 aa28.23■■■□□ 2.11
SPG7-208ENST00000563783 LAG3P18627 525 aa28.23■■■□□ 2.11
SPG7-208ENST00000563783 GATMP50440 423 aa28.23■■■□□ 2.11
SPG7-208ENST00000563783 NEK4P51957 841 aa28.23■■■□□ 2.11
SPG7-208ENST00000563783 HYAL1Q12794 435 aa28.23■■■□□ 2.11
SPG7-208ENST00000563783 PDE12Q6L8Q7 609 aaKnown RBP28.23■■■□□ 2.11
SPG7-208ENST00000563783 NSUN7Q8NE18 718 aaKnown RBP28.23■■■□□ 2.11
SPG7-208ENST00000563783 NLRP7Q8WX94 980 aa28.23■■■□□ 2.11
SPG7-208ENST00000563783 SCLT1Q96NL6 688 aa28.23■■■□□ 2.11
SPG7-208ENST00000563783 CLDND1Q9NY35 253 aa28.23■■■□□ 2.11
SPG7-208ENST00000563783 A0A0U1RQF3 1178 aa28.22■■■□□ 2.11
SPG7-208ENST00000563783 DDX11L8A8MPP1 907 aa28.22■■■□□ 2.11
SPG7-208ENST00000563783 GAS2O43903 313 aaKnown RBP28.22■■■□□ 2.11
SPG7-208ENST00000563783 LTBRP36941 435 aa28.22■■■□□ 2.11
SPG7-208ENST00000563783 EPHA7Q15375 998 aa28.22■■■□□ 2.11
SPG7-208ENST00000563783 FAM102BQ5T8I3 360 aa28.22■■■□□ 2.11
SPG7-208ENST00000563783 ECHDC2Q86YB7 292 aa28.22■■■□□ 2.11
SPG7-208ENST00000563783 C4orf19Q8IY42 314 aa28.22■■■□□ 2.11
SPG7-208ENST00000563783 CYP26B1Q9NR63 512 aa28.22■■■□□ 2.11
SPG7-208ENST00000563783 GJB4Q9NTQ9 266 aa28.22■■■□□ 2.11
SPG7-208ENST00000563783 LZTS1Q9Y250 596 aa28.22■■■□□ 2.11
SPG7-208ENST00000563783 BAG4O95429 457 aaKnown RBP28.21■■■□□ 2.11
SPG7-208ENST00000563783 SFPQP23246 707 aaKnown RBP eCLIP28.21■■■□□ 2.11
SPG7-208ENST00000563783 LRRC43Q8N309 656 aa28.21■■■□□ 2.11
SPG7-208ENST00000563783 POF1BQ8WVV4 589 aa28.21■■■□□ 2.11
SPG7-208ENST00000563783 CARNS1A5YM72 827 aa28.2■■■□□ 2.1
SPG7-208ENST00000563783 CENPBP07199 599 aaPredicted RBP28.2■■■□□ 2.1
SPG7-208ENST00000563783 DNAJB1P25685 340 aa28.2■■■□□ 2.1
SPG7-208ENST00000563783 RFC5P40937 340 aa28.2■■■□□ 2.1
SPG7-208ENST00000563783 SPIRE1Q08AE8 756 aa28.2■■■□□ 2.1
SPG7-208ENST00000563783 NECAB1Q8N987 351 aa28.2■■■□□ 2.1
SPG7-208ENST00000563783 COLGALT1Q8NBJ5 622 aa28.2■■■□□ 2.1
SPG7-208ENST00000563783 SLC7A3Q8WY07 619 aa28.2■■■□□ 2.1
SPG7-208ENST00000563783 DHX33Q9H6R0 707 aaKnown RBP28.2■■■□□ 2.1
SPG7-208ENST00000563783 CWH43Q9H720 699 aa28.2■■■□□ 2.1
SPG7-208ENST00000563783 TYW1Q9NV66 732 aaKnown RBP28.2■■■□□ 2.1
SPG7-208ENST00000563783 H3BQ06 376 aaPredicted RBP28.19■■■□□ 2.1
SPG7-208ENST00000563783 LARGE1O95461 756 aa28.19■■■□□ 2.1
SPG7-208ENST00000563783 PPM1AP35813 382 aa28.19■■■□□ 2.1
SPG7-208ENST00000563783 PLCB3Q01970 1234 aa28.19■■■□□ 2.1
SPG7-208ENST00000563783 ADAM15Q13444 863 aa28.19■■■□□ 2.1
SPG7-208ENST00000563783 DRP2Q13474 957 aa28.19■■■□□ 2.1
SPG7-208ENST00000563783 ZNF598Q86UK7 904 aaKnown RBP28.19■■■□□ 2.1
SPG7-208ENST00000563783 EFHBQ8N7U6 833 aa28.19■■■□□ 2.1
SPG7-208ENST00000563783 CASD1Q96PB1 797 aa28.19■■■□□ 2.1
SPG7-208ENST00000563783 RNF19AQ9NV58 838 aa28.19■■■□□ 2.1
SPG7-208ENST00000563783 SUCLA2Q9P2R7 463 aaPredicted RBP28.19■■■□□ 2.1
SPG7-208ENST00000563783 MARCH6O60337 910 aa28.18■■■□□ 2.1
SPG7-208ENST00000563783 FGF18O76093 207 aa28.18■■■□□ 2.1
SPG7-208ENST00000563783 FGFR1P11362 822 aa28.18■■■□□ 2.1
SPG7-208ENST00000563783 SKIP12755 728 aa28.18■■■□□ 2.1
SPG7-208ENST00000563783 IL9P15248 144 aa28.18■■■□□ 2.1
SPG7-208ENST00000563783 NR5A1Q13285 461 aa28.18■■■□□ 2.1
SPG7-208ENST00000563783 TRIM29Q14134 588 aa28.18■■■□□ 2.1
SPG7-208ENST00000563783 EARS2Q5JPH6 523 aaKnown RBP28.18■■■□□ 2.1
SPG7-208ENST00000563783 SPOUT1Q5T280 376 aaKnown RBP28.18■■■□□ 2.1
SPG7-208ENST00000563783 OTUD6AQ7L8S5 288 aa28.18■■■□□ 2.1
SPG7-208ENST00000563783 POTEDQ86YR6 584 aa28.18■■■□□ 2.1
SPG7-208ENST00000563783 ABI1Q8IZP0 508 aa28.18■■■□□ 2.1
SPG7-208ENST00000563783 MRPL9Q9BYD2 267 aaKnown RBP28.18■■■□□ 2.1
SPG7-208ENST00000563783 ZSWIM4Q9H7M6 989 aa28.18■■■□□ 2.1
SPG7-208ENST00000563783 TMEM150BA6NC51 233 aa28.17■■■□□ 2.1
SPG7-208ENST00000563783 GJD3Q8N144 294 aa28.17■■■□□ 2.1
SPG7-208ENST00000563783 CDCA3Q99618 268 aaPredicted RBP28.17■■■□□ 2.1
SPG7-208ENST00000563783 LXNQ9BS40 222 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms