RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 TUBGCP5Q96RT8 1024 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 ELF4Q99607 663 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 ZNF341Q9BYN7 854 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 NELFAQ9H3P2 528 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 TLR9Q9NR96 1032 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 DENND2AQ9ULE3 1009 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 VWA7Q9Y334 891 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 CD2APQ9Y5K6 639 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 HS3ST3A1Q9Y663 406 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 PMS2P1A4D2B8 440 aa4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 DGCR2P98153 550 aa4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 MYBPC3Q14896 1274 aa4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 EPHA7Q15375 998 aa4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 MIIPQ5JXC2 388 aa4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 RABGGTAQ92696 567 aa4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 NKD2Q969F2 451 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 ZNF503Q96F45 646 aa4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 RNPC3Q96LT9 517 aaKnown RBP4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 SORCS2Q96PQ0 1159 aa4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 OXSMQ9NWU1 459 aa4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 H2AFY2Q9P0M6 372 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 MAGEC2Q9UBF1 373 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 RBM8AQ9Y5S9 174 aaKnown RBP4.95□□□□□ -1.62
HMGB1P33-201ENST00000563485 C2orf78A6NCI8 922 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 FAM83GA6ND36 823 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 NPIPB8E9PQR5 432 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 CYR61O00622 381 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 KPNA6O60684 536 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 H2AFYO75367 372 aaKnown RBP4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 C1SP09871 688 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 ACRV1P26436 265 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 ADCY7P51828 1080 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 SESN2P58004 480 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 ADAM8P78325 824 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 TKFCQ3LXA3 575 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 IGFL4Q6B9Z1 124 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 D2HGDHQ8N465 521 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 IL17DQ8TAD2 202 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 GFM2Q969S9 779 aaKnown RBP4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 SLC7A6OSQ96CW6 309 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 RPL10LQ96L21 214 aaKnown RBP4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 TOMM22Q9NS69 142 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 POLR3BQ9NW08 1133 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 KCMF1Q9P0J7 381 aa4.94□□□□□ -1.62
HMGB1P33-201ENST00000563485 A0A1W2PRX2 142 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 CAPN14A8MX76 684 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 ATP2A2P16615 1042 aaKnown RBP4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 HIBADHP31937 336 aaKnown RBP4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 BPIFB4P59827 614 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 KLF10Q13118 480 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 TCIRG1Q13488 830 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 TCEA2Q15560 299 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 SPTY2D1Q68D10 685 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 USP51Q70EK9 711 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 ADGRE4PQ86SQ3 457 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 SGMS1Q86VZ5 419 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 NME9Q86XW9 330 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 HOMER1Q86YM7 354 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 C1orf210Q8IVY1 113 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 NXPE1Q8N323 547 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 SYNPOQ8N3V7 929 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 ANKRD53Q8N9V6 530 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 RTF1Q92541 710 aaKnown RBP4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 GCDHQ92947 438 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 LPPQ93052 612 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 DYDC2Q96IM9 177 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 GPHA2Q96T91 129 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 CSRNP2Q9H175 543 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 SLC6A15Q9H2J7 730 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 INTS7Q9NVH2 962 aaKnown RBP4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 DNAI1Q9UI46 699 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 ING1Q9UK53 422 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 SH3BP1Q9Y3L3 701 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 SPO11Q9Y5K1 396 aa4.93□□□□□ -1.62
HMGB1P33-201ENST00000563485 ZNF891A8MT65 544 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 APOL3O95236 402 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 NEK4P51957 841 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 BCAR1P56945 870 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 HHEXQ03014 270 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 PTH1RQ03431 593 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 BMP8AQ7Z5Y6 402 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 CLEC14AQ86T13 490 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 PHYKPLQ8IUZ5 450 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 C7orf31Q8N865 590 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 RPGRQ92834 1020 aaKnown RBP4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 WDR92Q96MX6 357 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 ORAI3Q9BRQ5 295 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 MYL10Q9BUA6 226 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 HAPLN2Q9GZV7 340 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 PCED1AQ9H1Q7 454 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 POFUT1Q9H488 388 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 ZMAT4Q9H898 229 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 FANCLQ9NW38 375 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 ZKSCAN5Q9Y2L8 839 aa4.92□□□□□ -1.62
HMGB1P33-201ENST00000563485 PRPF6O94906 941 aaKnown RBP4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 ZNF202O95125 648 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 F2P00734 622 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 HNRNPLP14866 589 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 HMGA2P52926 109 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 DSG1Q02413 1049 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms