RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 PLATP00750 562 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 HMGCRP04035 888 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 CSF2RBP32927 897 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 ADCY8P40145 1251 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 KPNA1P52294 538 aaPredicted RBP6.82□□□□□ -1.32
LINC00254-201ENST00000563416 TTC38Q5R3I4 469 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 KANK2Q63ZY3 851 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 GRAMD4Q6IC98 578 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 FOXRED1Q96CU9 486 aaPredicted RBP6.82□□□□□ -1.32
LINC00254-201ENST00000563416 MAML3Q96JK9 1138 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 ELF4Q99607 663 aaPredicted RBP6.82□□□□□ -1.32
LINC00254-201ENST00000563416 BDH2Q9BUT1 245 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 ZDHHC5Q9C0B5 715 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 THG1LQ9NWX6 298 aaKnown RBP6.82□□□□□ -1.32
LINC00254-201ENST00000563416 Q9UFV3 132 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 PREX2Q70Z35 1606 aa6.82□□□□□ -1.32
LINC00254-201ENST00000563416 A0A087X0B3 334 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 FOXD2O60548 495 aaPredicted RBP6.81□□□□□ -1.32
LINC00254-201ENST00000563416 MAFO75444 373 aaPredicted RBP6.81□□□□□ -1.32
LINC00254-201ENST00000563416 PRLP01236 227 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 IL2P60568 153 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 CD83Q01151 205 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 MOGSQ13724 837 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 ZMAT1Q5H9K5 638 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 TMEM200BQ69YZ2 307 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 C11orf74Q86VG3 221 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 C7orf31Q8N865 590 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 SMC1BQ8NDV3 1235 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 CHTF18Q8WVB6 975 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 LEO1Q8WVC0 666 aaPredicted RBP6.81□□□□□ -1.32
LINC00254-201ENST00000563416 C16orf92Q96LL3 132 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 TUBGCP5Q96RT8 1024 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 JADE2Q9NQC1 790 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 CNOT11Q9UKZ1 510 aaKnown RBP6.81□□□□□ -1.32
LINC00254-201ENST00000563416 ARAP3Q8WWN8 1544 aa6.81□□□□□ -1.32
LINC00254-201ENST00000563416 MAFGO15525 162 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 CELA3BP08861 270 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 CD40P25942 277 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 PTX3P26022 381 aaPredicted RBP6.8□□□□□ -1.32
LINC00254-201ENST00000563416 KCNQ1P51787 676 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 PPP2CBP62714 309 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 PPP2CAP67775 309 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 SLC6A3Q01959 620 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 PLP2Q04941 152 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 EIF4HQ15056 248 aaKnown RBP6.8□□□□□ -1.32
LINC00254-201ENST00000563416 SEPT7Q16181 437 aaKnown RBP6.8□□□□□ -1.32
LINC00254-201ENST00000563416 PRAMEF9Q5VWM5 478 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 CREB3L3Q68CJ9 461 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 SLFN12LQ6IEE8 588 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 TIGD7Q6NT04 549 aaPredicted RBP6.8□□□□□ -1.32
LINC00254-201ENST00000563416 GPR155Q7Z3F1 870 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 PHYKPLQ8IUZ5 450 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 RPGRQ92834 1020 aaKnown RBP6.8□□□□□ -1.32
LINC00254-201ENST00000563416 TMX1Q9H3N1 280 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 SLC4A7Q9Y6M7 1214 aa6.8□□□□□ -1.32
LINC00254-201ENST00000563416 FRMPD1Q5SYB0 1578 aa6.79□□□□□ -1.32
LINC00254-201ENST00000563416 CD109Q6YHK3 1445 aa6.79□□□□□ -1.32
LINC00254-201ENST00000563416 SOX5P35711 763 aa6.79□□□□□ -1.32
LINC00254-201ENST00000563416 MEOX1P50221 254 aa6.79□□□□□ -1.32
LINC00254-201ENST00000563416 SKOR2Q2VWA4 1001 aaPredicted RBP6.79□□□□□ -1.32
LINC00254-201ENST00000563416 TBC1D10BQ4KMP7 808 aaPredicted RBP6.79□□□□□ -1.32
LINC00254-201ENST00000563416 GLB1LQ6UWU2 654 aa6.79□□□□□ -1.32
LINC00254-201ENST00000563416 RTKN2Q8IZC4 609 aa6.79□□□□□ -1.32
LINC00254-201ENST00000563416 GPR101Q96P66 508 aaPredicted RBP6.79□□□□□ -1.32
LINC00254-201ENST00000563416 H2AFY2Q9P0M6 372 aaPredicted RBP6.79□□□□□ -1.32
LINC00254-201ENST00000563416 ITSN2Q9NZM3 1697 aa6.79□□□□□ -1.32
LINC00254-201ENST00000563416 TROQ12816 1431 aaPredicted RBP6.78□□□□□ -1.32
LINC00254-201ENST00000563416 ZNF888P0CJ79 500 aaPredicted RBP6.78□□□□□ -1.32
LINC00254-201ENST00000563416 LSSP48449 732 aa6.78□□□□□ -1.32
LINC00254-201ENST00000563416 EPHB4P54760 987 aa6.78□□□□□ -1.32
LINC00254-201ENST00000563416 RRADP55042 308 aa6.78□□□□□ -1.32
LINC00254-201ENST00000563416 LRRC32Q14392 662 aa6.78□□□□□ -1.32
LINC00254-201ENST00000563416 DDX46Q7L014 1031 aaKnown RBP6.78□□□□□ -1.32
LINC00254-201ENST00000563416 THNSL2Q86YJ6 484 aa6.78□□□□□ -1.32
LINC00254-201ENST00000563416 USP7Q93009 1102 aa6.78□□□□□ -1.32
LINC00254-201ENST00000563416 CAAP1Q9H8G2 361 aa6.78□□□□□ -1.32
LINC00254-201ENST00000563416 USP36Q9P275 1121 aaKnown RBP6.78□□□□□ -1.32
LINC00254-201ENST00000563416 CDC42EP3Q9UKI2 254 aa6.78□□□□□ -1.32
LINC00254-201ENST00000563416 PRKAB1Q9Y478 270 aa6.78□□□□□ -1.32
LINC00254-201ENST00000563416 NEO1Q92859 1461 aa6.78□□□□□ -1.32
LINC00254-201ENST00000563416 TIAM1Q13009 1591 aa6.78□□□□□ -1.32
LINC00254-201ENST00000563416 EHBP1L1Q8N3D4 1523 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 SUPT6HQ7KZ85 1726 aaKnown RBP6.77□□□□□ -1.33
LINC00254-201ENST00000563416 NPEPPSL1A6NEC2 478 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 K7ESM1 405 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 FKBP9O95302 570 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 ITGB3P05106 788 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 RGS3P49796 1198 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 BCAR1P56945 870 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 DHCR24Q15392 516 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 GPR158Q5T848 1215 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 SLFN13Q68D06 897 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 ESRP1Q6NXG1 681 aaKnown RBP6.77□□□□□ -1.33
LINC00254-201ENST00000563416 FKBP9P1Q75LS8 142 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 CHAC2Q8WUX2 184 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 SEC61A2Q9H9S3 476 aa6.77□□□□□ -1.33
LINC00254-201ENST00000563416 VPS8Q8N3P4 1428 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 CANXP27824 592 aaKnown RBP6.76□□□□□ -1.33
LINC00254-201ENST00000563416 LSP1P33241 339 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 STAT3P40763 770 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms