RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 EIF4BP23588 611 aaKnown RBP23.64■■□□□ 1.37
CHD9-208ENST00000563410 CYP3A7P24462 503 aa23.64■■□□□ 1.37
CHD9-208ENST00000563410 GPC3P51654 580 aa23.64■■□□□ 1.37
CHD9-208ENST00000563410 ERVFC1P60507 584 aa23.64■■□□□ 1.37
CHD9-208ENST00000563410 TARBP2Q15633 366 aaKnown RBP23.64■■□□□ 1.37
CHD9-208ENST00000563410 SMRP1Q8NCR6 262 aa23.64■■□□□ 1.37
CHD9-208ENST00000563410 AIFM3Q96NN9 605 aa23.64■■□□□ 1.37
CHD9-208ENST00000563410 CASD1Q96PB1 797 aa23.64■■□□□ 1.37
CHD9-208ENST00000563410 TLR9Q9NR96 1032 aa23.64■■□□□ 1.37
CHD9-208ENST00000563410 CYP46A1Q9Y6A2 500 aa23.64■■□□□ 1.37
CHD9-208ENST00000563410 TECTAO75443 2155 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 DEXIO95424 95 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 COASYQ13057 564 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 LRRC55Q6ZSA7 311 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 THNSL1Q8IYQ7 743 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 BLIDQ8IZY5 108 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 ZNF710Q8N1W2 664 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 DAGLBQ8NCG7 672 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 MBOAT7Q96N66 472 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 CEP89Q96ST8 783 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 C22orf23Q9BZE7 217 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 TM6SF1Q9BZW5 370 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 TMEM117Q9H0C3 514 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 BARX2Q9UMQ3 279 aaPredicted RBP23.63■■□□□ 1.37
CHD9-208ENST00000563410 ZNF318Q5VUA4 2279 aa23.63■■□□□ 1.37
CHD9-208ENST00000563410 FSCN2O14926 492 aa23.62■■□□□ 1.37
CHD9-208ENST00000563410 STBD1O95210 358 aa23.62■■□□□ 1.37
CHD9-208ENST00000563410 DARSP14868 501 aaKnown RBP23.62■■□□□ 1.37
CHD9-208ENST00000563410 DRP2Q13474 957 aa23.62■■□□□ 1.37
CHD9-208ENST00000563410 MIER3Q7Z3K6 550 aa23.62■■□□□ 1.37
CHD9-208ENST00000563410 RDM1Q8NG50 284 aa23.62■■□□□ 1.37
CHD9-208ENST00000563410 POP1Q99575 1024 aaKnown RBP23.62■■□□□ 1.37
CHD9-208ENST00000563410 UPF3BQ9BZI7 483 aaKnown RBP23.62■■□□□ 1.37
CHD9-208ENST00000563410 TLE6Q9H808 572 aa23.62■■□□□ 1.37
CHD9-208ENST00000563410 CPLX1O14810 134 aa23.61■■□□□ 1.37
CHD9-208ENST00000563410 PER2O15055 1255 aa23.61■■□□□ 1.37
CHD9-208ENST00000563410 ZSCAN20P17040 1043 aaPredicted RBP23.61■■□□□ 1.37
CHD9-208ENST00000563410 LAG3P18627 525 aa23.61■■□□□ 1.37
CHD9-208ENST00000563410 FGFR4P22455 802 aa23.61■■□□□ 1.37
CHD9-208ENST00000563410 RBM10P98175 930 aaKnown RBP23.61■■□□□ 1.37
CHD9-208ENST00000563410 TBC1D8BQ0IIM8 1120 aa23.61■■□□□ 1.37
CHD9-208ENST00000563410 STK3Q13188 491 aa23.61■■□□□ 1.37
CHD9-208ENST00000563410 CSPP1Q1MSJ5 1256 aa23.61■■□□□ 1.37
CHD9-208ENST00000563410 ECHDC2Q86YB7 292 aa23.61■■□□□ 1.37
CHD9-208ENST00000563410 VN1R2Q8NFZ6 395 aa23.61■■□□□ 1.37
CHD9-208ENST00000563410 ETNPPLQ8TBG4 499 aa23.61■■□□□ 1.37
CHD9-208ENST00000563410 MICAL1Q8TDZ2 1067 aa23.61■■□□□ 1.37
CHD9-208ENST00000563410 NIFKQ9BYG3 293 aaKnown RBP23.61■■□□□ 1.37
CHD9-208ENST00000563410 TMEM150BA6NC51 233 aa23.6■■□□□ 1.37
CHD9-208ENST00000563410 PLCB3Q01970 1234 aa23.6■■□□□ 1.37
CHD9-208ENST00000563410 MOXD1Q6UVY6 613 aa23.6■■□□□ 1.37
CHD9-208ENST00000563410 LZTS1Q9Y250 596 aa23.6■■□□□ 1.37
CHD9-208ENST00000563410 IGKV6-21A0A0C4DH24 114 aa23.59■■□□□ 1.37
CHD9-208ENST00000563410 HOXA2O43364 376 aa23.59■■□□□ 1.37
CHD9-208ENST00000563410 DUSP6Q16828 381 aa23.59■■□□□ 1.37
CHD9-208ENST00000563410 MTERF2Q49AM1 385 aa23.59■■□□□ 1.37
CHD9-208ENST00000563410 XKR3Q5GH77 459 aa23.59■■□□□ 1.37
CHD9-208ENST00000563410 HERC4Q5GLZ8 1057 aaPredicted RBP23.59■■□□□ 1.37
CHD9-208ENST00000563410 CLLU1OSQ5K130 101 aa23.59■■□□□ 1.37
CHD9-208ENST00000563410 ZNF598Q86UK7 904 aaKnown RBP23.59■■□□□ 1.37
CHD9-208ENST00000563410 RNF135Q8IUD6 432 aa23.59■■□□□ 1.37
CHD9-208ENST00000563410 FAM177A1Q8N128 213 aaPredicted RBP23.59■■□□□ 1.37
CHD9-208ENST00000563410 MRPS27Q92552 414 aaKnown RBP23.59■■□□□ 1.37
CHD9-208ENST00000563410 SH2D3AQ9BRG2 576 aa23.59■■□□□ 1.37
CHD9-208ENST00000563410 SEPT9Q9UHD8 586 aaPredicted RBP23.59■■□□□ 1.37
CHD9-208ENST00000563410 MUTYHQ9UIF7 546 aa23.59■■□□□ 1.37
CHD9-208ENST00000563410 A0A0U1RQF3 1178 aa23.58■■□□□ 1.37
CHD9-208ENST00000563410 CSDE1O75534 798 aaKnown RBP23.58■■□□□ 1.37
CHD9-208ENST00000563410 ATF7P17544 494 aaPredicted RBP23.58■■□□□ 1.37
CHD9-208ENST00000563410 HOXD11P31277 338 aaPredicted RBP23.58■■□□□ 1.37
CHD9-208ENST00000563410 PBX3P40426 434 aa23.58■■□□□ 1.37
CHD9-208ENST00000563410 KCNC3Q14003 757 aa23.58■■□□□ 1.37
CHD9-208ENST00000563410 NONOQ15233 471 aaKnown RBP eCLIP23.58■■□□□ 1.379e-7■■■■□ 20.8
CHD9-208ENST00000563410 GALNT17Q6IS24 598 aa23.58■■□□□ 1.37
CHD9-208ENST00000563410 PDE12Q6L8Q7 609 aaKnown RBP23.58■■□□□ 1.37
CHD9-208ENST00000563410 KCNT2Q6UVM3 1135 aa23.58■■□□□ 1.37
CHD9-208ENST00000563410 LRRC43Q8N309 656 aa23.58■■□□□ 1.37
CHD9-208ENST00000563410 NLRP7Q8WX94 980 aa23.58■■□□□ 1.37
CHD9-208ENST00000563410 CDCA3Q99618 268 aaPredicted RBP23.58■■□□□ 1.37
CHD9-208ENST00000563410 KCNJ14Q9UNX9 436 aa23.58■■□□□ 1.37
CHD9-208ENST00000563410 USP15Q9Y4E8 981 aaPredicted RBP23.58■■□□□ 1.37
CHD9-208ENST00000563410 PIEZO1Q92508 2521 aa23.57■■□□□ 1.36
CHD9-208ENST00000563410 SLC37A4O43826 429 aa23.57■■□□□ 1.36
CHD9-208ENST00000563410 INF2Q27J81 1249 aa23.57■■□□□ 1.36
CHD9-208ENST00000563410 PLPP4Q5VZY2 271 aa23.57■■□□□ 1.36
CHD9-208ENST00000563410 SCLT1Q96NL6 688 aa23.57■■□□□ 1.36
CHD9-208ENST00000563410 PDRG1Q9NUG6 133 aa23.57■■□□□ 1.36
CHD9-208ENST00000563410 DDX25Q9UHL0 483 aaKnown RBP23.57■■□□□ 1.36
CHD9-208ENST00000563410 WDFY4Q6ZS81 3184 aa23.56■■□□□ 1.36
CHD9-208ENST00000563410 LOC730098B7Z3J9 87 aa23.56■■□□□ 1.36
CHD9-208ENST00000563410 SCRN1Q12765 414 aa23.56■■□□□ 1.36
CHD9-208ENST00000563410 CPLX2Q6PUV4 134 aaKnown RBP23.56■■□□□ 1.36
CHD9-208ENST00000563410 ABI1Q8IZP0 508 aa23.56■■□□□ 1.36
CHD9-208ENST00000563410 RNF169Q8NCN4 708 aa23.56■■□□□ 1.36
CHD9-208ENST00000563410 ZNF558Q96NG5 402 aa23.56■■□□□ 1.36
CHD9-208ENST00000563410 PHF20Q9BVI0 1012 aa23.56■■□□□ 1.36
CHD9-208ENST00000563410 A0A087WZ62 844 aa23.55■■□□□ 1.36
CHD9-208ENST00000563410 FSD2A1L4K1 749 aa23.55■■□□□ 1.36
CHD9-208ENST00000563410 EML1O00423 815 aa23.55■■□□□ 1.36
CHD9-208ENST00000563410 EOMESO95936 686 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms