RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 DARSP14868 501 aaKnown RBP18.88■□□□□ 0.61
CLK3-210ENST00000563112 C8orf34Q49A92 452 aa18.88■□□□□ 0.61
CLK3-210ENST00000563112 NAALADL2Q58DX5 795 aa18.88■□□□□ 0.61
CLK3-210ENST00000563112 ANO5Q75V66 913 aa18.88■□□□□ 0.61
CLK3-210ENST00000563112 P2RX5Q93086 422 aa18.88■□□□□ 0.61
CLK3-210ENST00000563112 ZNF668Q96K58 619 aaPredicted RBP18.88■□□□□ 0.61
CLK3-210ENST00000563112 SH2D3AQ9BRG2 576 aa18.88■□□□□ 0.61
CLK3-210ENST00000563112 NSUN3Q9H649 340 aaKnown RBP18.88■□□□□ 0.61
CLK3-210ENST00000563112 ELAC1Q9H777 363 aaKnown RBP18.88■□□□□ 0.61
CLK3-210ENST00000563112 CYP26B1Q9NR63 512 aa18.88■□□□□ 0.61
CLK3-210ENST00000563112 TMEM161AQ9NX61 479 aa18.88■□□□□ 0.61
CLK3-210ENST00000563112 SUCLA2Q9P2R7 463 aaPredicted RBP18.88■□□□□ 0.61
CLK3-210ENST00000563112 PPME1Q9Y570 386 aa18.88■□□□□ 0.61
CLK3-210ENST00000563112 IGKV6-21A0A0C4DH24 114 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 LINC00271P0C7V0 271 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 KCNQ1P51787 676 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 FAM189BP81408 668 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 DSC3Q14574 896 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 CALCRLQ16602 461 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 SPOUT1Q5T280 376 aaKnown RBP18.87■□□□□ 0.61
CLK3-210ENST00000563112 OTUD6AQ7L8S5 288 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 SLC7A3Q8WY07 619 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 CEP170P1Q96L14 293 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 CEP89Q96ST8 783 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 INO80BQ9C086 356 aaPredicted RBP18.87■□□□□ 0.61
CLK3-210ENST00000563112 UBE2ZQ9H832 354 aaPredicted RBP18.87■□□□□ 0.61
CLK3-210ENST00000563112 SH2B1Q9NRF2 756 aaPredicted RBP18.87■□□□□ 0.61
CLK3-210ENST00000563112 AAASQ9NRG9 546 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 PCDHA12Q9UN75 941 aa18.87■□□□□ 0.61
CLK3-210ENST00000563112 VCANP13611 3396 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 TBKBP1A7MCY6 615 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 GRM6O15303 877 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 HOXA2O43364 376 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 GATMP50440 423 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 HMGN5P82970 282 aaKnown RBP18.86■□□□□ 0.61
CLK3-210ENST00000563112 ST3GAL1Q11201 340 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 DRP2Q13474 957 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 PLA2G4FQ68DD2 849 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 ZNF410Q86VK4 478 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 C4orf19Q8IY42 314 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 C8orf76Q96K31 380 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 LXNQ9BS40 222 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 ZSWIM4Q9H7M6 989 aa18.86■□□□□ 0.61
CLK3-210ENST00000563112 TCF20Q9UGU0 1960 aaKnown RBP18.86■□□□□ 0.61
CLK3-210ENST00000563112 MYO7AQ13402 2215 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.85■□□□□ 0.61
CLK3-210ENST00000563112 NCK2O43639 380 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 NEMFO60524 1076 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 SFPQP23246 707 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLK3-210ENST00000563112 RFC5P40937 340 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 POLGP54098 1239 aaPredicted RBP18.85■□□□□ 0.61
CLK3-210ENST00000563112 TCEAL5Q5H9L2 206 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 FAM102BQ5T8I3 360 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 RHPN2Q8IUC4 686 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 FAM184AQ8NB25 1140 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 DYDC2Q96IM9 177 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 ALG13Q9NP73 1137 aaKnown RBP18.85■□□□□ 0.61
CLK3-210ENST00000563112 DACT1Q9NYF0 836 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 RGL1Q9NZL6 768 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 PLAGL2Q9UPG8 496 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 PCDHB12Q9Y5F1 795 aa18.85■□□□□ 0.61
CLK3-210ENST00000563112 A0A087WZ62 844 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 YWHABP31946 246 aaKnown RBP18.84■□□□□ 0.61
CLK3-210ENST00000563112 TXKP42681 527 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 NPEPPSP55786 919 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 GUCY1B3Q02153 619 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 SPIRE1Q08AE8 756 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 CTTNQ14247 550 aaKnown RBP18.84■□□□□ 0.61
CLK3-210ENST00000563112 XKR9Q5GH70 373 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 TPH2Q8IWU9 490 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 ABI1Q8IZP0 508 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 KLHL23Q8NBE8 558 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 PPP2R3CQ969Q6 453 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 FDXACB1Q9BRP7 624 aaPredicted RBP18.84■□□□□ 0.61
CLK3-210ENST00000563112 TMEM117Q9H0C3 514 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 TTC12Q9H892 705 aaPredicted RBP18.84■□□□□ 0.61
CLK3-210ENST00000563112 UPF2Q9HAU5 1272 aaKnown RBP18.84■□□□□ 0.61
CLK3-210ENST00000563112 CHST12Q9NRB3 414 aa18.84■□□□□ 0.61
CLK3-210ENST00000563112 SPTBN5Q9NRC6 3674 aaKnown RBP18.83■□□□□ 0.61
CLK3-210ENST00000563112 ATP2B1P20020 1258 aa18.83■□□□□ 0.6
CLK3-210ENST00000563112 FGFR4P22455 802 aa18.83■□□□□ 0.6
CLK3-210ENST00000563112 KCNA5P22460 613 aa18.83■□□□□ 0.6
CLK3-210ENST00000563112 RBM25P49756 843 aaKnown RBP18.83■□□□□ 0.6
CLK3-210ENST00000563112 CYP4A11Q02928 519 aa18.83■□□□□ 0.6
CLK3-210ENST00000563112 GNL2Q13823 731 aaKnown RBP18.83■□□□□ 0.6
CLK3-210ENST00000563112 CSPP1Q1MSJ5 1256 aa18.83■□□□□ 0.6
CLK3-210ENST00000563112 EP400NLQ6ZTU2 488 aa18.83■□□□□ 0.6
CLK3-210ENST00000563112 ECHDC2Q86YB7 292 aa18.83■□□□□ 0.6
CLK3-210ENST00000563112 RNF169Q8NCN4 708 aa18.83■□□□□ 0.6
CLK3-210ENST00000563112 NEK9Q8TD19 979 aa18.83■□□□□ 0.6
CLK3-210ENST00000563112 TCP11Q8WWU5 503 aa18.83■□□□□ 0.6
CLK3-210ENST00000563112 KIF2CQ99661 725 aa18.83■□□□□ 0.6
CLK3-210ENST00000563112 EIF2AK1Q9BQI3 630 aaKnown RBP18.83■□□□□ 0.6
CLK3-210ENST00000563112 WRAP73Q9P2S5 460 aaPredicted RBP18.83■□□□□ 0.6
CLK3-210ENST00000563112 FNDC1Q4ZHG4 1894 aaPredicted RBP18.82■□□□□ 0.6
CLK3-210ENST00000563112 GAS2O43903 313 aaKnown RBP18.82■□□□□ 0.6
CLK3-210ENST00000563112 CSDE1O75534 798 aaKnown RBP18.82■□□□□ 0.6
CLK3-210ENST00000563112 SLITRK3O94933 977 aa18.82■□□□□ 0.6
CLK3-210ENST00000563112 EOMESO95936 686 aa18.82■□□□□ 0.6
CLK3-210ENST00000563112 ITGB1P05556 798 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms