RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.18□□□□□ -1.1
CFDP1-202ENST00000562602 KLF16Q9BXK1 252 aaPredicted RBP8.18□□□□□ -1.1
CFDP1-202ENST00000562602 CAPS2Q9BXY5 557 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 GANQ9H2C0 597 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 CPVLQ9H3G5 476 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 SUGCTQ9HAC7 445 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 MLXIPQ9HAP2 919 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 TUFT1Q9NNX1 390 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 OLFML3Q9NRN5 406 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 RRP15Q9Y3B9 282 aaKnown RBP8.18□□□□□ -1.1
CFDP1-202ENST00000562602 ATXN2Q99700 1313 aaKnown RBP8.18□□□□□ -1.1
CFDP1-202ENST00000562602 THSD7AQ9UPZ6 1657 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 LY75O60449 1722 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 TAF1P21675 1872 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 MYH8P13535 1937 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 BAZ2BQ9UIF8 2168 aaKnown RBP8.17□□□□□ -1.1
CFDP1-202ENST00000562602 HMGB1P1B2RPK0 211 aaPredicted RBP8.17□□□□□ -1.1
CFDP1-202ENST00000562602 MYO1CO00159 1063 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 POLRMTO00411 1230 aaKnown RBP8.17□□□□□ -1.1
CFDP1-202ENST00000562602 EBAG9O00559 213 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 EPHB6O15197 1021 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 ZNF185O15231 689 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 ZEB2O60315 1214 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 LILRB3O75022 631 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 ENTPD3O75355 529 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 PALMO75781 387 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 ERLIN2O94905 339 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 PLEKP08567 350 aaPredicted RBP8.17□□□□□ -1.1
CFDP1-202ENST00000562602 GBP1P32455 592 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 PSMC2P35998 433 aaKnown RBP8.17□□□□□ -1.1
CFDP1-202ENST00000562602 STAT1P42224 750 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 SNRPFP62306 86 aaKnown RBP8.17□□□□□ -1.1
CFDP1-202ENST00000562602 CETN1Q12798 172 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 ALCAMQ13740 583 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 GIT2Q14161 759 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 PPP2R5AQ15172 486 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 LRRC41Q15345 812 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 UBE2SQ16763 222 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 STRIP1Q5VSL9 837 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 TATDN1Q6P1N9 297 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 LRRC31Q6UY01 552 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 RUFY4Q6ZNE9 571 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 HS2ST1Q7LGA3 356 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 KCNK18Q7Z418 384 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 ETNPPLQ8TBG4 499 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 NEK9Q8TD19 979 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 CRYGNQ8WXF5 182 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 FOXJ1Q92949 421 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 HPS3Q969F9 1004 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 SLITRK6Q9H5Y7 841 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 NLRC4Q9NPP4 1024 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 SUCLA2Q9P2R7 463 aaPredicted RBP8.17□□□□□ -1.1
CFDP1-202ENST00000562602 GGA2Q9UJY4 613 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 SERPINA10Q9UK55 444 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 TTC7AQ9ULT0 858 aaPredicted RBP8.17□□□□□ -1.1
CFDP1-202ENST00000562602 WASF2Q9Y6W5 498 aa8.17□□□□□ -1.1
CFDP1-202ENST00000562602 ZC3H4Q9UPT8 1303 aaKnown RBP8.17□□□□□ -1.1
CFDP1-202ENST00000562602 A0A087WUV0 522 aaPredicted RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 E9PMD0 336 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 AGPSO00116 658 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 PGRMC1O00264 195 aaKnown RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 EIF3HO15372 352 aaKnown RBP eCLIP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 WIPF1O43516 503 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 TLR2O60603 784 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 PPP1R11O60927 126 aaPredicted RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 PHACTR2O75167 634 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 COL2A1P02458 1487 aaPredicted RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 TFRCP02786 760 aaKnown RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 H2AFZP0C0S5 128 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 MYH1P12882 1939 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 UCHL3P15374 230 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 HSPA6P17066 643 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 CTHP32929 405 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 ZNF76P36508 570 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 CRKP46108 304 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 GYS2P54840 703 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 CORO7P57737 925 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 ATP2B2Q01814 1243 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 ICA1Q05084 483 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 BIRC3Q13489 604 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 ECM1Q16610 540 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 TUSC1Q2TAM9 212 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 SYDE2Q5VT97 1194 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 APOBEC3HQ6NTF7 200 aaKnown RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 ALKBH5Q6P6C2 394 aaKnown RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 SMIM5Q71RC9 77 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 H2AFVQ71UI9 128 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 IRF2BP2Q7Z5L9 587 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 CATSPER3Q86XQ3 398 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 SEPT12Q8IYM1 358 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 USP38Q8NB14 1042 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 SLC17A8Q8NDX2 589 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 MORC4Q8TE76 937 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 SMCR8Q8TEV9 937 aaPredicted RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 TMEM174Q8WUU8 243 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 EEF2KMTQ96G04 330 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 MASTLQ96GX5 879 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 DRC1Q96MC2 740 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 RUNDC3BQ96NL0 473 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms