RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 NLRC5Q86WI3 1866 aa17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 TRANK1O15050 2925 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 SYT1P21579 422 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 RFC5P40937 340 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 HTRA4P83105 476 aaPredicted RBP17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 ATP2C1P98194 919 aaPredicted RBP17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 EMC2Q15006 297 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 POTEGQ6S5H5 508 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 KSR1Q8IVT5 923 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 NLRP7Q8WX94 980 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 SLC7A3Q8WY07 619 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 TMEM143Q96AN5 459 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 SCLT1Q96NL6 688 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 JPH2Q9BR39 696 aaPredicted RBP17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 POLR3CQ9BUI4 534 aaPredicted RBP17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 FTHL17Q9BXU8 183 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 TSPYL2Q9H2G4 693 aaPredicted RBP17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 XPNPEP1Q9NQW7 623 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 ANKEF1Q9NU02 776 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 PPME1Q9Y570 386 aa17.17■□□□□ 0.34
CCNDBP1-203ENST00000562553 SPTBN5Q9NRC6 3674 aaKnown RBP17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 A0A087WZ62 844 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 LINC01553A4QN01 128 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 EPOPA6NHQ4 379 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 PP2D1A8MPX8 630 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 CSDE1O75534 798 aaKnown RBP17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 DARSP14868 501 aaKnown RBP17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 PDCP20941 246 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 FGFR4P22455 802 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 EIF4BP23588 611 aaKnown RBP17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 RARRES1P49788 294 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 DNM2P50570 870 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 ECM1Q16610 540 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 RHPN2Q8IUC4 686 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 HSCBQ8IWL3 235 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 IGSF22Q8N9C0 903 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 FDXACB1Q9BRP7 624 aaPredicted RBP17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 LRWD1Q9UFC0 647 aa17.16■□□□□ 0.34
CCNDBP1-203ENST00000562553 LAD1O00515 517 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 GPR182O15218 404 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 RPA1P27694 616 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 PRPHP41219 470 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 RESTQ13127 1097 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 ADGRE1Q14246 886 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 BRAPQ7Z569 592 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 ZNF710Q8N1W2 664 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 ERMNQ8TAM6 284 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 SP7Q8TDD2 431 aaPredicted RBP17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 SYMPKQ92797 1274 aaKnown RBP17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 NLRP4Q96MN2 994 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 YME1L1Q96TA2 773 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 MTRQ99707 1265 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 ADAM2Q99965 735 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 INSL6Q9Y581 213 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 COL4A3BPQ9Y5P4 624 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 MYH15Q9Y2K3 1946 aa17.15■□□□□ 0.34
CCNDBP1-203ENST00000562553 KIAA1671Q9BY89 1806 aa17.14■□□□□ 0.34
CCNDBP1-203ENST00000562553 FNDC1Q4ZHG4 1894 aaPredicted RBP17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 RFXAPO00287 272 aa17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 IBSPP21815 317 aaPredicted RBP17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 CDC25AP30304 524 aa17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 CCT6AP40227 531 aaKnown RBP17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 DSC3Q14574 896 aa17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 ODR4Q5SWX8 454 aa17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 HAUS3Q68CZ6 603 aa17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 DTHD1Q6ZMT9 781 aa17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 ZNF410Q86VK4 478 aa17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 CRIPAKQ8N1N5 446 aa17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 PSPC1Q8WXF1 523 aaKnown RBP17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 ARNTL2Q8WYA1 636 aa17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 CCDC43Q96MW1 224 aaKnown RBP17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 RC3H2Q9HBD1 1191 aaKnown RBP17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 MTMR6Q9Y217 621 aa17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 RALGAPA2Q2PPJ7 1873 aa17.14■□□□□ 0.33
CCNDBP1-203ENST00000562553 DENND3A2RUS2 1198 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 GAS2O43903 313 aaKnown RBP17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 USO1O60763 962 aaKnown RBP17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 XRCC6P12956 609 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 LAMTOR4Q0VGL1 99 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 PDIA5Q14554 519 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 FAM173BQ6P4H8 233 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 NPAS4Q8IUM7 802 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 EXOC8Q8IYI6 725 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 SNX29Q8TEQ0 813 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 NACC1Q96RE7 527 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 MMTAG2Q9BU76 263 aaKnown RBP17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 GCOM2Q9BZD3 368 aaPredicted RBP17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 ATP6V0A4Q9HBG4 840 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 IFT122Q9HBG6 1241 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 RGS18Q9NS28 235 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 DBR1Q9UK59 544 aaKnown RBP17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 MTUS1Q9ULD2 1270 aa17.13■□□□□ 0.33
CCNDBP1-203ENST00000562553 REV3LO60673 3130 aa17.12■□□□□ 0.33
CCNDBP1-203ENST00000562553 C9IYK1 514 aa17.12■□□□□ 0.33
CCNDBP1-203ENST00000562553 DGAT1O75907 488 aa17.12■□□□□ 0.33
CCNDBP1-203ENST00000562553 SARSP49591 514 aaKnown RBP17.12■□□□□ 0.33
CCNDBP1-203ENST00000562553 GATMP50440 423 aa17.12■□□□□ 0.33
CCNDBP1-203ENST00000562553 CDC42EP1Q00587 391 aa17.12■□□□□ 0.33
CCNDBP1-203ENST00000562553 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms