RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CHMP24386 653 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 ADH6P28332 368 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 TSPAN7P41732 249 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 STAT1P42224 750 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 PIK3CAP42336 1068 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 ASPAP45381 313 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 MECP2P51608 486 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 CASP5P51878 434 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 ITGA8P53708 1063 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 DRG2P55039 364 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 POLE2P56282 527 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 CCT2P78371 535 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 SMAD3P84022 425 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 ZBED6P86452 979 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 CACNB2Q08289 660 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 ZNF543Q08ER8 600 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 WASHC5Q12768 1159 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 DUSP4Q13115 394 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 LAPTM5Q13571 262 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 SLC12A1Q13621 1099 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 PMS2P11Q13670 270 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 DAG1Q14118 895 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 SPARCL1Q14515 664 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 TTLL4Q14679 1199 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 SMAD2Q15796 467 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 NKG7Q16617 165 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 PFKFB4Q16877 469 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 SLC44A4Q53GD3 710 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 EXOSC6Q5RKV6 272 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 ZNF468Q5VIY5 522 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 EEF1DP3Q658K8 133 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 LMBRD2Q68DH5 695 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 CYB5RLQ6IPT4 315 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 HIBCHQ6NVY1 386 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 LETMD1Q6P1Q0 360 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 KLHL17Q6TDP4 642 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 ARHGAP36Q6ZRI8 547 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 ENOSF1Q7L5Y1 443 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 TMC6Q7Z403 805 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 KDELC2Q7Z4H8 507 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 TTC7BQ86TV6 843 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 CDH24Q86UP0 819 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 OSTM1Q86WC4 334 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 HEATR4Q86WZ0 1026 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 VSIG1Q86XK7 387 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 LMNTD2Q8IXW0 634 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 NLGN4XQ8N0W4 816 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 CCAR2Q8N163 923 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 VWA5B2Q8N398 1253 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 LSMEM1Q8N8F7 131 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 WDR48Q8TAF3 677 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 FRS2Q8WU20 508 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 IPCEF1Q8WWN9 437 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 DPF3Q92784 378 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 HPS1Q92902 700 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 FATE1Q969F0 183 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 GTPBP3Q969Y2 492 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 SYTL4Q96C24 671 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 EAF2Q96CJ1 260 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 HVCN1Q96D96 273 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 IQCDQ96DY2 449 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 SUCLG2Q96I99 432 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 ZNF496Q96IT1 587 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 RADILQ96JH8 1075 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 MAELQ96JY0 434 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 ZC3H10Q96K80 434 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 CNDP2Q96KP4 475 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 NT5C1BQ96P26 610 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 SERINC2Q96SA4 455 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 TREX2Q9BQ50 279 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 LPIN3Q9BQK8 851 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 KATNAL1Q9BW62 490 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 YIPF2Q9BWQ6 316 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 SORBS1Q9BX66 1292 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 MRPL9Q9BYD2 267 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 PRDM14Q9GZV8 571 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 MAGEH1Q9H213 219 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 DBNDD1Q9H9R9 158 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 EIF2B3Q9NR50 452 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 ANKEF1Q9NU02 776 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 TOR4AQ9NXH8 423 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 NFKBIL1Q9UBC1 381 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 ORC3Q9UBD5 711 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 HCSTQ9UBK5 93 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 GRHPRQ9UBQ7 328 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 DPP7Q9UHL4 492 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 FEZ2Q9UHY8 353 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 CPA4Q9UI42 421 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 GJD2Q9UKL4 321 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 SLC39A10Q9ULF5 831 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 GPR34Q9UPC5 381 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 TIMM13Q9Y5L4 95 aaPredicted RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 CFAP20Q9Y6A4 193 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 LOC100289279A0A1B0GTE1 492 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 A0A1W2PQ27 194 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 A0A1W2PQ64 194 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 A0A1W2PQC6 194 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 A0A1W2PQD8 194 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 CDC14CA4D256 554 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 PRAMEF25A6NGN4 478 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms