RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TMEM117Q9H0C3 514 aa11.91□□□□□ -0.5
CDC42BPB-207ENST00000560492 CWH43Q9H720 699 aa11.91□□□□□ -0.5
CDC42BPB-207ENST00000560492 RIC8AQ9NPQ8 531 aa11.91□□□□□ -0.5
CDC42BPB-207ENST00000560492 SPG21Q9NZD8 308 aa11.91□□□□□ -0.5
CDC42BPB-207ENST00000560492 CDH22Q9UJ99 828 aa11.91□□□□□ -0.5
CDC42BPB-207ENST00000560492 LZTS1Q9Y250 596 aa11.91□□□□□ -0.5
CDC42BPB-207ENST00000560492 CFAP54Q96N23 3096 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 CNTNAP5Q8WYK1 1306 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 SMCO2A6NFE2 343 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 FSCN2O14926 492 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 CCNE2O96020 404 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 WEE2P0C1S8 567 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 LIFRP42702 1097 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 METAP2P50579 478 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 CLCN3P51790 818 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 PLCB3Q01970 1234 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 RARS2Q5T160 578 aaKnown RBP11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 JAKMIP3Q5VZ66 844 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 PPP1R18Q6NYC8 613 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 SYCE2Q6PIF2 218 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 ABHD15Q6UXT9 468 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 ZNF577Q9BSK1 485 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 S1PR5Q9H228 398 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 POMKQ9H5K3 350 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 RBM28Q9NW13 759 aaKnown RBP11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 SORCS3Q9UPU3 1222 aa11.9□□□□□ -0.5
CDC42BPB-207ENST00000560492 C2CD4DB7Z1M9 353 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 IPO5O00410 1097 aaKnown RBP11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 SLC27A2O14975 620 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 ATG7O95352 703 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 C22orf31O95567 290 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 ASGR2P07307 311 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 TMOD1P28289 359 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 MTHFRP42898 656 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 NLRP11P59045 1033 aaKnown RBP11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 AP3B2Q13367 1082 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 RTN1Q16799 776 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 UBALD2Q8IYN6 164 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 LRRC71Q8N4P6 559 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 TDRD5Q8NAT2 981 aaKnown RBP11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 RASGRP4Q8TDF6 673 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 HELQQ8TDG4 1101 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 BBXQ8WY36 941 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 TMEM169Q96HH4 297 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 NECTIN4Q96NY8 510 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 CASD1Q96PB1 797 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 ELAC1Q9H777 363 aaKnown RBP11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 ANO2Q9NQ90 1003 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 DBR1Q9UK59 544 aaKnown RBP11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 CEP131Q9UPN4 1083 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 HCFC2Q9Y5Z7 792 aa11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 V9GY48 417 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPB-207ENST00000560492 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 GOLGA8AA7E2F4 631 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 GOLGA8BA8MQT2 603 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 NT5C1B-RDH14C9J2C7 533 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 MEIS1O00470 390 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 ZBTB43O43298 467 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 BRD1O95696 1058 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 CXCL14O95715 111 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 PSAPP07602 524 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 SREBF1P36956 1147 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 ALDH7A1P49419 539 aaKnown RBP11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 FGD1P98174 961 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 ITIH3Q06033 890 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 CREB3L3Q68CJ9 461 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 EFCAB12Q6NXP0 572 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 TMEM184AQ6ZMB5 413 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 FAM43BQ6ZT52 329 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 ECHDC2Q86YB7 292 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 FLCNQ8NFG4 579 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 NLRP7Q8WX94 980 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 GLT8D2Q9H1C3 349 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 SMOC2Q9H3U7 446 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 GABBR1Q9UBS5 961 aa11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 ZFHX2Q9C0A1 2572 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPB-207ENST00000560492 IGKV6D-21A0A0A0MT36 114 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 hCG_1984214I3L0E3 225 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 MAGEB2O15479 319 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 ZC3H11AO75152 810 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 GPR32O75388 356 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 FGFR4P22455 802 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 RFX1P22670 979 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 COL9A3Q14050 684 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 LONRF3Q496Y0 759 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 TYW1BQ6NUM6 668 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 APOA5Q6Q788 366 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 LRRC55Q6ZSA7 311 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 NIPA1Q7RTP0 329 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 ASCL5Q7RTU5 278 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 C12orf76Q8N812 135 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 ZNF713Q8N859 430 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 TMEM105Q8N8V8 129 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 AUTS2Q8WXX7 1259 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 FAM167AQ96KS9 214 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 TCEANC2Q96MN5 208 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 MRPL9Q9BYD2 267 aaKnown RBP11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 ADAM7Q9H2U9 754 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 TBC1D22BQ9NU19 505 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 BARHL2Q9NY43 387 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms