RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 VAV3Q9UKW4 847 aa16.54■□□□□ 0.24
IDH3A-219ENST00000560414 NOC2LQ9Y3T9 749 aaKnown RBP16.54■□□□□ 0.24
IDH3A-219ENST00000560414 WDR81Q562E7 1941 aa16.54■□□□□ 0.24
IDH3A-219ENST00000560414 LOXHD1Q8IVV2 1947 aa16.54■□□□□ 0.24
IDH3A-219ENST00000560414 REV3LO60673 3130 aa16.54■□□□□ 0.24
IDH3A-219ENST00000560414 MAGEB2O15479 319 aa16.53■□□□□ 0.24
IDH3A-219ENST00000560414 MARCH6O60337 910 aa16.53■□□□□ 0.24
IDH3A-219ENST00000560414 GPR32O75388 356 aa16.53■□□□□ 0.24
IDH3A-219ENST00000560414 RPS6KA5O75582 802 aa16.53■□□□□ 0.24
IDH3A-219ENST00000560414 POU3F3P20264 500 aaPredicted RBP16.53■□□□□ 0.24
IDH3A-219ENST00000560414 TRIM29Q14134 588 aa16.53■□□□□ 0.24
IDH3A-219ENST00000560414 MTERF2Q49AM1 385 aa16.53■□□□□ 0.24
IDH3A-219ENST00000560414 ZNF668Q96K58 619 aaPredicted RBP16.53■□□□□ 0.24
IDH3A-219ENST00000560414 OSMRQ99650 979 aa16.53■□□□□ 0.24
IDH3A-219ENST00000560414 NPDC1Q9NQX5 325 aaPredicted RBP16.53■□□□□ 0.24
IDH3A-219ENST00000560414 SEPT9Q9UHD8 586 aaPredicted RBP16.53■□□□□ 0.24
IDH3A-219ENST00000560414 WNT7AO00755 349 aa16.52■□□□□ 0.24
IDH3A-219ENST00000560414 IBSPP21815 317 aaPredicted RBP16.52■□□□□ 0.24
IDH3A-219ENST00000560414 RBM25P49756 843 aaKnown RBP16.52■□□□□ 0.24
IDH3A-219ENST00000560414 CRYBB1P53674 252 aaPredicted RBP16.52■□□□□ 0.24
IDH3A-219ENST00000560414 EMP3P54852 163 aa16.52■□□□□ 0.24
IDH3A-219ENST00000560414 PPP2R5CQ13362 524 aa16.52■□□□□ 0.24
IDH3A-219ENST00000560414 TARBP2Q15633 366 aaKnown RBP16.52■□□□□ 0.24
IDH3A-219ENST00000560414 XKR3Q5GH77 459 aa16.52■□□□□ 0.24
IDH3A-219ENST00000560414 LINC01465Q8N7H1 131 aa16.52■□□□□ 0.24
IDH3A-219ENST00000560414 NAP1L4Q99733 375 aaKnown RBP16.52■□□□□ 0.24
IDH3A-219ENST00000560414 FTHL17Q9BXU8 183 aa16.52■□□□□ 0.24
IDH3A-219ENST00000560414 ERVK-5Q9HDB9 667 aa16.52■□□□□ 0.24
IDH3A-219ENST00000560414 ST3GAL5Q9UNP4 418 aa16.52■□□□□ 0.24
IDH3A-219ENST00000560414 AKT3Q9Y243 479 aa16.52■□□□□ 0.24
IDH3A-219ENST00000560414 TTC3P53804 2025 aa16.52■□□□□ 0.23
IDH3A-219ENST00000560414 DDX11L8A8MPP1 907 aa16.51■□□□□ 0.23
IDH3A-219ENST00000560414 MGEA5O60502 916 aa16.51■□□□□ 0.23
IDH3A-219ENST00000560414 TMOD1P28289 359 aa16.51■□□□□ 0.23
IDH3A-219ENST00000560414 NLRP11P59045 1033 aaKnown RBP16.51■□□□□ 0.23
IDH3A-219ENST00000560414 TBC1D8BQ0IIM8 1120 aa16.51■□□□□ 0.23
IDH3A-219ENST00000560414 DRP2Q13474 957 aa16.51■□□□□ 0.23
IDH3A-219ENST00000560414 SKIV2LQ15477 1246 aaKnown RBP16.51■□□□□ 0.23
IDH3A-219ENST00000560414 EPC2Q52LR7 807 aa16.51■□□□□ 0.23
IDH3A-219ENST00000560414 MARVELD3Q96A59 401 aa16.51■□□□□ 0.23
IDH3A-219ENST00000560414 ZSCAN31Q96LW9 406 aaPredicted RBP16.51■□□□□ 0.23
IDH3A-219ENST00000560414 CEP89Q96ST8 783 aa16.51■□□□□ 0.23
IDH3A-219ENST00000560414 MAP7D2Q96T17 732 aa16.51■□□□□ 0.23
IDH3A-219ENST00000560414 COL25A1Q9BXS0 654 aaPredicted RBP16.51■□□□□ 0.23
IDH3A-219ENST00000560414 NIFKQ9BYG3 293 aaKnown RBP16.51■□□□□ 0.23
IDH3A-219ENST00000560414 TBX3O15119 743 aa16.5■□□□□ 0.23
IDH3A-219ENST00000560414 PSMC5P62195 406 aa16.5■□□□□ 0.23
IDH3A-219ENST00000560414 PLA2G4FQ68DD2 849 aa16.5■□□□□ 0.23
IDH3A-219ENST00000560414 NCAPH2Q6IBW4 605 aa16.5■□□□□ 0.23
IDH3A-219ENST00000560414 ANO5Q75V66 913 aa16.5■□□□□ 0.23
IDH3A-219ENST00000560414 FAM228AQ86W67 206 aa16.5■□□□□ 0.23
IDH3A-219ENST00000560414 TMEM192Q8IY95 271 aa16.5■□□□□ 0.23
IDH3A-219ENST00000560414 CRIPAKQ8N1N5 446 aa16.5■□□□□ 0.23
IDH3A-219ENST00000560414 FIBCD1Q8N539 461 aa16.5■□□□□ 0.23
IDH3A-219ENST00000560414 LLPHQ9BRT6 129 aaKnown RBP16.5■□□□□ 0.23
IDH3A-219ENST00000560414 ADAMTS10Q9H324 1103 aa16.5■□□□□ 0.23
IDH3A-219ENST00000560414 RC3H2Q9HBD1 1191 aaKnown RBP16.5■□□□□ 0.23
IDH3A-219ENST00000560414 WRAP73Q9P2S5 460 aaPredicted RBP16.5■□□□□ 0.23
IDH3A-219ENST00000560414 COL4A4P53420 1690 aaPredicted RBP16.5■□□□□ 0.23
IDH3A-219ENST00000560414 GPR182O15218 404 aa16.49■□□□□ 0.23
IDH3A-219ENST00000560414 DGKIO75912 1065 aa16.49■□□□□ 0.23
IDH3A-219ENST00000560414 BAG4O95429 457 aaKnown RBP16.49■□□□□ 0.23
IDH3A-219ENST00000560414 ATP2B1P20020 1258 aa16.49■□□□□ 0.23
IDH3A-219ENST00000560414 QARSP47897 775 aaKnown RBP16.49■□□□□ 0.23
IDH3A-219ENST00000560414 NPEPPSP55786 919 aa16.49■□□□□ 0.23
IDH3A-219ENST00000560414 SPIRE1Q08AE8 756 aa16.49■□□□□ 0.23
IDH3A-219ENST00000560414 BTG3Q14201 252 aaPredicted RBP16.49■□□□□ 0.23
IDH3A-219ENST00000560414 VARS2Q5ST30 1063 aaKnown RBP16.49■□□□□ 0.23
IDH3A-219ENST00000560414 ZNF689Q96CS4 500 aaPredicted RBP16.49■□□□□ 0.23
IDH3A-219ENST00000560414 C8orf76Q96K31 380 aa16.49■□□□□ 0.23
IDH3A-219ENST00000560414 ADAM2Q99965 735 aa16.49■□□□□ 0.23
IDH3A-219ENST00000560414 SH2B1Q9NRF2 756 aaPredicted RBP16.49■□□□□ 0.23
IDH3A-219ENST00000560414 RGL1Q9NZL6 768 aa16.49■□□□□ 0.23
IDH3A-219ENST00000560414 THEGQ9P2T0 379 aa16.49■□□□□ 0.23
IDH3A-219ENST00000560414 SPTBN5Q9NRC6 3674 aaKnown RBP16.49■□□□□ 0.23
IDH3A-219ENST00000560414 ADGRA3Q8IWK6 1321 aa16.48■□□□□ 0.23
IDH3A-219ENST00000560414 P4HBP07237 508 aaKnown RBP16.48■□□□□ 0.23
IDH3A-219ENST00000560414 LINC00271P0C7V0 271 aa16.48■□□□□ 0.23
IDH3A-219ENST00000560414 GATMP50440 423 aa16.48■□□□□ 0.23
IDH3A-219ENST00000560414 GPC3P51654 580 aa16.48■□□□□ 0.23
IDH3A-219ENST00000560414 EPHA7Q15375 998 aa16.48■□□□□ 0.23
IDH3A-219ENST00000560414 SAFBQ15424 915 aaKnown RBP eCLIP16.48■□□□□ 0.23
IDH3A-219ENST00000560414 CALCRLQ16602 461 aa16.48■□□□□ 0.23
IDH3A-219ENST00000560414 PAN2Q504Q3 1202 aaKnown RBP16.48■□□□□ 0.23
IDH3A-219ENST00000560414 NPAS4Q8IUM7 802 aa16.48■□□□□ 0.23
IDH3A-219ENST00000560414 SLFN12Q8IYM2 578 aa16.48■□□□□ 0.23
IDH3A-219ENST00000560414 DYDC2Q96IM9 177 aa16.48■□□□□ 0.23
IDH3A-219ENST00000560414 SAMD11Q96NU1 681 aa16.48■□□□□ 0.23
IDH3A-219ENST00000560414 XIRP2A4UGR9 3374 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 IGKV6-21A0A0C4DH24 114 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 DENND3A2RUS2 1198 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 ZBTB39O15060 712 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 CSDE1O75534 798 aaKnown RBP16.47■□□□□ 0.23
IDH3A-219ENST00000560414 STAG3L1P0CL83 205 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 FGFR4P22455 802 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 EIF4BP23588 611 aaKnown RBP16.47■□□□□ 0.23
IDH3A-219ENST00000560414 CTNNB1P35222 781 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 SARSP49591 514 aaKnown RBP16.47■□□□□ 0.23
IDH3A-219ENST00000560414 CYP4A11Q02928 519 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 TFF2Q03403 129 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms