RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 RAD51AP2Q09MP3 1159 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 KMT5BQ4FZB7 885 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 BRDTQ58F21 947 aaPredicted RBP10.42□□□□□ -0.74
HERC1-206ENST00000559996 MTHFD1LQ6UB35 978 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 SESTD1Q86VW0 696 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 PCSK9Q8NBP7 692 aaKnown RBP10.42□□□□□ -0.74
HERC1-206ENST00000559996 ARRDC4Q8NCT1 418 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 RASSF8Q8NHQ8 419 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 LMBR1Q8WVP7 490 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 BSNDQ8WZ55 320 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 FAM167AQ96KS9 214 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 STRA6Q9BX79 667 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 FGFBP2Q9BYJ0 223 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 SPC25Q9HBM1 224 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 GPRC5CQ9NQ84 441 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 KCND2Q9NZV8 630 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 MAN1B1Q9UKM7 699 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 PPME1Q9Y570 386 aa10.42□□□□□ -0.74
HERC1-206ENST00000559996 EVPLQ92817 2033 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 COL1A2P08123 1366 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 LOXHD1Q8IVV2 1947 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 NRCAMQ92823 1304 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 A0A1W2PQ45 241 aaPredicted RBP10.41□□□□□ -0.74
HERC1-206ENST00000559996 A0A1W2PQY0 241 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 DNM1LO00429 736 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 TREHO43280 583 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 ZEB2O60315 1214 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 USO1O60763 962 aaKnown RBP10.41□□□□□ -0.74
HERC1-206ENST00000559996 RHOBTB3O94955 611 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 RPN1P04843 607 aaKnown RBP10.41□□□□□ -0.74
HERC1-206ENST00000559996 SSBP05455 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
HERC1-206ENST00000559996 AMPD3Q01432 767 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 MORC3Q14149 939 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 KCNB1Q14721 858 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 GRIK4Q16099 956 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 ZSCAN23Q3MJ62 389 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 GDF6Q6KF10 455 aaPredicted RBP10.41□□□□□ -0.74
HERC1-206ENST00000559996 UNC13DQ70J99 1090 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 KIAA0319LQ8IZA0 1049 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 GLIS3Q8NEA6 775 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 HPS3Q969F9 1004 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 GSDMAQ96QA5 445 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 NTPCRQ9BSD7 190 aaKnown RBP10.41□□□□□ -0.74
HERC1-206ENST00000559996 GTF2IRD1Q9UHL9 959 aa10.41□□□□□ -0.74
HERC1-206ENST00000559996 ZNF215Q9UL58 517 aaPredicted RBP10.41□□□□□ -0.74
HERC1-206ENST00000559996 RRN3P2A6NIE6 340 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 CABYRO75952 493 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 RFC5P40937 340 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 IGBP1P78318 339 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 STK4Q13043 487 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 COASYQ13057 564 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 PPFIA1Q13136 1202 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 ITGA7Q13683 1181 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 EMC2Q15006 297 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 ISM2Q6H9L7 571 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 EFCAB12Q6NXP0 572 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 NFRKBQ6P4R8 1299 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 RUFY4Q6ZNE9 571 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 MAEAQ7L5Y9 396 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 UBE2Q1Q7Z7E8 422 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 LRRC71Q8N4P6 559 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 ASAP3Q8TDY4 903 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 DIS3LQ8TF46 1054 aaKnown RBP10.4□□□□□ -0.74
HERC1-206ENST00000559996 WNT8BQ93098 351 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 TMEM143Q96AN5 459 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 MED15Q96RN5 788 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 KATNAL1Q9BW62 490 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 LRRC27Q9C0I9 530 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 PANK4Q9NVE7 773 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 ODF2LQ9ULJ1 636 aa10.4□□□□□ -0.74
HERC1-206ENST00000559996 KAT6AQ92794 2004 aa10.4□□□□□ -0.75
HERC1-206ENST00000559996 SYCE3A1L190 88 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 MAGEB2O15479 319 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 PPP1R37O75864 691 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 TFRCP02786 760 aaKnown RBP10.39□□□□□ -0.75
HERC1-206ENST00000559996 GLRA2P23416 452 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 HOXD13P35453 343 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 CASP5P51878 434 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 RTP1P59025 263 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 ASIC1P78348 528 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 TBC1D8BQ0IIM8 1120 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 COL13A1Q5TAT6 717 aaPredicted RBP10.39□□□□□ -0.75
HERC1-206ENST00000559996 EPM2AIP1Q7L775 607 aaPredicted RBP10.39□□□□□ -0.75
HERC1-206ENST00000559996 TAS1R3Q7RTX0 852 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 ZNF720Q7Z2F6 126 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 KIAA0895Q8NCT3 520 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 PRPF31Q8WWY3 499 aaKnown RBP10.39□□□□□ -0.75
HERC1-206ENST00000559996 DHX38Q92620 1227 aaKnown RBP10.39□□□□□ -0.75
HERC1-206ENST00000559996 KCNN1Q92952 543 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 SMARCE1Q969G3 411 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 TIPINQ9BVW5 301 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 CDHR5Q9HBB8 845 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 ATP6V0A4Q9HBG4 840 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 GDAQ9Y2T3 454 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 DNAH12Q6ZR08 3092 aa10.39□□□□□ -0.75
HERC1-206ENST00000559996 ADGRA3Q8IWK6 1321 aa10.38□□□□□ -0.75
HERC1-206ENST00000559996 SMIM35A0A1B0GVV1 85 aa10.38□□□□□ -0.75
HERC1-206ENST00000559996 C17orf102A2RUQ5 167 aa10.38□□□□□ -0.75
HERC1-206ENST00000559996 PPP1R3GB7ZBB8 358 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms