RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 USP38Q8NB14 1042 aa17.74■□□□□ 0.43
APH1B-207ENST00000559971 INPP4AQ96PE3 977 aaPredicted RBP17.74■□□□□ 0.43
APH1B-207ENST00000559971 FIZ1Q96SL8 496 aa17.74■□□□□ 0.43
APH1B-207ENST00000559971 NAP1L3Q99457 506 aaPredicted RBP17.74■□□□□ 0.43
APH1B-207ENST00000559971 RNF216Q9NWF9 866 aaPredicted RBP17.74■□□□□ 0.43
APH1B-207ENST00000559971 EXOC7Q9UPT5 735 aa17.74■□□□□ 0.43
APH1B-207ENST00000559971 USP20Q9Y2K6 914 aa17.74■□□□□ 0.43
APH1B-207ENST00000559971 CTDP1Q9Y5B0 961 aaPredicted RBP17.74■□□□□ 0.43
APH1B-207ENST00000559971 UBIAD1Q9Y5Z9 338 aa17.74■□□□□ 0.43
APH1B-207ENST00000559971 SYF2O95926 243 aaKnown RBP17.73■□□□□ 0.43
APH1B-207ENST00000559971 TMEM253P0C7T8 217 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 ARP10275 920 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 SFNP31947 248 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 CASP4P49662 377 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 MCCD1P59942 119 aaPredicted RBP17.73■□□□□ 0.43
APH1B-207ENST00000559971 ENPEPQ07075 957 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 BFSP1Q12934 665 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 CUL1Q13616 776 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 PADI6Q6TGC4 694 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 SND1Q7KZF4 910 aaKnown RBP eCLIP17.73■□□□□ 0.43
APH1B-207ENST00000559971 C1orf131Q8NDD1 294 aaKnown RBP17.73■□□□□ 0.43
APH1B-207ENST00000559971 TPCN2Q8NHX9 752 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 HOOK2Q96ED9 719 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 CCDC43Q96MW1 224 aaKnown RBP17.73■□□□□ 0.43
APH1B-207ENST00000559971 CAMKK2Q96RR4 588 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 APEX2Q9UBZ4 518 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 KCNG1Q9UIX4 513 aa17.73■□□□□ 0.43
APH1B-207ENST00000559971 ERICH4A6NGS2 130 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 MAFGO15525 162 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 NCK2O43639 380 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 EXOC3O60645 756 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 HIP1RO75146 1068 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 CAPN2P17655 700 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 RPS12P25398 132 aaKnown RBP17.72■□□□□ 0.43
APH1B-207ENST00000559971 QARSP47897 775 aaKnown RBP17.72■□□□□ 0.43
APH1B-207ENST00000559971 MYL7Q01449 175 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 RASA3Q14644 834 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 LRRC57Q8N9N7 239 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 FAM76AQ8TAV0 307 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 INTS2Q9H0H0 1204 aaKnown RBP17.72■□□□□ 0.43
APH1B-207ENST00000559971 RBM12Q9NTZ6 932 aaKnown RBP17.72■□□□□ 0.43
APH1B-207ENST00000559971 ANKEF1Q9NU02 776 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 DMGDHQ9UI17 866 aaKnown RBP17.72■□□□□ 0.43
APH1B-207ENST00000559971 TMEM59LQ9UK28 342 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 DNAJC12Q9UKB3 198 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 TTC7AQ9ULT0 858 aaPredicted RBP17.72■□□□□ 0.43
APH1B-207ENST00000559971 NCANO14594 1321 aa17.72■□□□□ 0.43
APH1B-207ENST00000559971 F8VZ95 297 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 PGRMC1O00264 195 aaKnown RBP17.71■□□□□ 0.43
APH1B-207ENST00000559971 CTNND1O60716 968 aaKnown RBP17.71■□□□□ 0.43
APH1B-207ENST00000559971 ZBED4O75132 1171 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 FTCDO95954 541 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 PLS3P13797 630 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 CXCR5P32302 372 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 MATR3P43243 847 aaKnown RBP eCLIP17.71■□□□□ 0.43
APH1B-207ENST00000559971 TCEAL1Q15170 157 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 ZSCAN26Q16670 478 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 PEX26Q7Z412 305 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 USP37Q86T82 979 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 C4orf19Q8IY42 314 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 SLC30A5Q8TAD4 765 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 RBM46Q8TBY0 533 aaKnown RBP17.71■□□□□ 0.43
APH1B-207ENST00000559971 CTNNBL1Q8WYA6 563 aaPredicted RBP17.71■□□□□ 0.43
APH1B-207ENST00000559971 RFFLQ8WZ73 363 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 SLITRK6Q9H5Y7 841 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 FAM204AQ9H8W3 233 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 AGO4Q9HCK5 861 aaKnown RBP17.71■□□□□ 0.43
APH1B-207ENST00000559971 KCNH7Q9NS40 1196 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 PGAP2Q9UHJ9 254 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 AMFRQ9UKV5 643 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 PFASO15067 1338 aa17.71■□□□□ 0.43
APH1B-207ENST00000559971 K7ENM7 598 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 EVI5O60447 810 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 TNFAIP3P21580 790 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 SCP2P22307 547 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 HADHBP55084 474 aaKnown RBP17.7■□□□□ 0.42
APH1B-207ENST00000559971 KRT76Q01546 638 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 KIF22Q14807 665 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 DRAP1Q14919 205 aaPredicted RBP17.7■□□□□ 0.42
APH1B-207ENST00000559971 TKFCQ3LXA3 575 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 MAATS1Q7Z4T9 603 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 RHOT2Q8IXI1 618 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 RASGEF1CQ8N431 466 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 CCDC26Q8TAB7 109 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 MORC4Q8TE76 937 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 FAM81BQ96LP2 452 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 SH3GL2Q99962 352 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.7■□□□□ 0.42
APH1B-207ENST00000559971 ZNF341Q9BYN7 854 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 TMEM39BQ9GZU3 492 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 TSPYL1Q9H0U9 437 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 C17orf75Q9HAS0 396 aa17.7■□□□□ 0.42
APH1B-207ENST00000559971 ZC3H4Q9UPT8 1303 aaKnown RBP17.7■□□□□ 0.42
APH1B-207ENST00000559971 GOLGA6CA6NDK9 693 aa17.69■□□□□ 0.42
APH1B-207ENST00000559971 SFI1A8K8P3 1242 aa17.69■□□□□ 0.42
APH1B-207ENST00000559971 DDX3XO00571 662 aaKnown RBP eCLIP17.69■□□□□ 0.421e-6■■■■■ 39.4
APH1B-207ENST00000559971 KCNK3O14649 394 aa17.69■□□□□ 0.42
APH1B-207ENST00000559971 HEXIM1O94992 359 aaKnown RBP17.69■□□□□ 0.42
APH1B-207ENST00000559971 GOLGA6DP0CG33 693 aa17.69■□□□□ 0.42
APH1B-207ENST00000559971 GGCXP38435 758 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms