RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 ANO5Q75V66 913 aa22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 POTEDQ86YR6 584 aa22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 ZNF668Q96K58 619 aaPredicted RBP22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 SH2D3AQ9BRG2 576 aa22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 ELAC1Q9H777 363 aaKnown RBP22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 TMEM161AQ9NX61 479 aa22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 PLAGL2Q9UPG8 496 aa22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 MARCH6O60337 910 aa22.96■■□□□ 1.27
CHRNA3-207ENST00000559941 MAFO75444 373 aaPredicted RBP22.96■■□□□ 1.27
CHRNA3-207ENST00000559941 MMP1P03956 469 aa22.96■■□□□ 1.27
CHRNA3-207ENST00000559941 P4HBP07237 508 aaKnown RBP22.96■■□□□ 1.27
CHRNA3-207ENST00000559941 ST3GAL1Q11201 340 aa22.96■■□□□ 1.27
CHRNA3-207ENST00000559941 LEXMQ3ZCV2 418 aa22.96■■□□□ 1.27
CHRNA3-207ENST00000559941 FAM102BQ5T8I3 360 aa22.96■■□□□ 1.27
CHRNA3-207ENST00000559941 ATP6V0A4Q9HBG4 840 aa22.96■■□□□ 1.27
CHRNA3-207ENST00000559941 ALG13Q9NP73 1137 aaKnown RBP22.96■■□□□ 1.27
CHRNA3-207ENST00000559941 PLXNA4Q9HCM2 1894 aa22.96■■□□□ 1.27
CHRNA3-207ENST00000559941 BAG4O95429 457 aaKnown RBP22.95■■□□□ 1.26
CHRNA3-207ENST00000559941 ZSCAN20P17040 1043 aaPredicted RBP22.95■■□□□ 1.26
CHRNA3-207ENST00000559941 KCNA5P22460 613 aa22.95■■□□□ 1.26
CHRNA3-207ENST00000559941 DNM2P50570 870 aa22.95■■□□□ 1.26
CHRNA3-207ENST00000559941 COL19A1Q14993 1142 aa22.95■■□□□ 1.26
CHRNA3-207ENST00000559941 EPHA7Q15375 998 aa22.95■■□□□ 1.26
CHRNA3-207ENST00000559941 SLFN12Q8IYM2 578 aa22.95■■□□□ 1.26
CHRNA3-207ENST00000559941 SPPL3Q8TCT6 385 aa22.95■■□□□ 1.26
CHRNA3-207ENST00000559941 NLRP7Q8WX94 980 aa22.95■■□□□ 1.26
CHRNA3-207ENST00000559941 PABPC5Q96DU9 382 aaKnown RBP22.95■■□□□ 1.26
CHRNA3-207ENST00000559941 SCLT1Q96NL6 688 aa22.95■■□□□ 1.26
CHRNA3-207ENST00000559941 TBKBP1A7MCY6 615 aa22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 BTBD18B2RXH4 712 aa22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 ITGB1P05556 798 aa22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 CAMK1Q14012 370 aa22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 TRIM29Q14134 588 aa22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 PLA2G4FQ68DD2 849 aa22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 DIS3L2Q8IYB7 885 aaKnown RBP22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 KLHL23Q8NBE8 558 aa22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 NEK9Q8TD19 979 aa22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 JPH2Q9BR39 696 aaPredicted RBP22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 GCOM2Q9BZD3 368 aaPredicted RBP22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 CYP26B1Q9NR63 512 aa22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 LIMCH1Q9UPQ0 1083 aa22.94■■□□□ 1.26
CHRNA3-207ENST00000559941 NCK2O43639 380 aa22.93■■□□□ 1.26
CHRNA3-207ENST00000559941 SPIRE1Q08AE8 756 aa22.93■■□□□ 1.26
CHRNA3-207ENST00000559941 C4orf19Q8IY42 314 aa22.93■■□□□ 1.26
CHRNA3-207ENST00000559941 SUCLA2Q9P2R7 463 aaPredicted RBP22.93■■□□□ 1.26
CHRNA3-207ENST00000559941 WRAP73Q9P2S5 460 aaPredicted RBP22.93■■□□□ 1.26
CHRNA3-207ENST00000559941 PPME1Q9Y570 386 aa22.93■■□□□ 1.26
CHRNA3-207ENST00000559941 ARID2Q68CP9 1835 aa22.93■■□□□ 1.26
CHRNA3-207ENST00000559941 A0A087WZ62 844 aa22.92■■□□□ 1.26
CHRNA3-207ENST00000559941 FGFR1P11362 822 aa22.92■■□□□ 1.26
CHRNA3-207ENST00000559941 FGFR4P22455 802 aa22.92■■□□□ 1.26
CHRNA3-207ENST00000559941 NPEPPSP55786 919 aa22.92■■□□□ 1.26
CHRNA3-207ENST00000559941 NCAPH2Q6IBW4 605 aa22.92■■□□□ 1.26
CHRNA3-207ENST00000559941 ZNF410Q86VK4 478 aa22.92■■□□□ 1.26
CHRNA3-207ENST00000559941 ECHDC2Q86YB7 292 aa22.92■■□□□ 1.26
CHRNA3-207ENST00000559941 EXOC8Q8IYI6 725 aa22.92■■□□□ 1.26
CHRNA3-207ENST00000559941 FDXACB1Q9BRP7 624 aaPredicted RBP22.92■■□□□ 1.26
CHRNA3-207ENST00000559941 AAASQ9NRG9 546 aa22.92■■□□□ 1.26
CHRNA3-207ENST00000559941 HOXA2O43364 376 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 DNAJB1P25685 340 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 FOSBP53539 338 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 HYAL1Q12794 435 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 C8orf34Q49A92 452 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 SPOUT1Q5T280 376 aaKnown RBP22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 RHPN2Q8IUC4 686 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 POF1BQ8WVV4 589 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 DYDC2Q96IM9 177 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 CEP170P1Q96L14 293 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 LXNQ9BS40 222 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 INO80BQ9C086 356 aaPredicted RBP22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 TMEM117Q9H0C3 514 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 RNF19AQ9NV58 838 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 TYW1Q9NV66 732 aaKnown RBP22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 RGL1Q9NZL6 768 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 PCDHB12Q9Y5F1 795 aa22.91■■□□□ 1.26
CHRNA3-207ENST00000559941 A0A0U1RQF3 1178 aa22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 CSDE1O75534 798 aaKnown RBP22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 CALCRLQ16602 461 aa22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 CTC1Q2NKJ3 1217 aa22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 PUS10Q3MIT2 529 aaKnown RBP22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 CCDC83Q8IWF9 413 aa22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 ZNF579Q8NAF0 562 aaKnown RBP22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 CASD1Q96PB1 797 aa22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 DHX33Q9H6R0 707 aaKnown RBP22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 CWH43Q9H720 699 aa22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 ZSWIM4Q9H7M6 989 aa22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 CHST12Q9NRB3 414 aa22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 CLDND1Q9NY35 253 aa22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 DACT1Q9NYF0 836 aa22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 PCDHA12Q9UN75 941 aa22.9■■□□□ 1.26
CHRNA3-207ENST00000559941 H3BQ06 376 aaPredicted RBP22.89■■□□□ 1.25
CHRNA3-207ENST00000559941 WNT7AO00755 349 aa22.89■■□□□ 1.25
CHRNA3-207ENST00000559941 EOMESO95936 686 aa22.89■■□□□ 1.25
CHRNA3-207ENST00000559941 SFPQP23246 707 aaKnown RBP eCLIP22.89■■□□□ 1.25
CHRNA3-207ENST00000559941 YWHABP31946 246 aaKnown RBP22.89■■□□□ 1.25
CHRNA3-207ENST00000559941 RFC5P40937 340 aa22.89■■□□□ 1.25
CHRNA3-207ENST00000559941 PTCRAQ6ISU1 281 aaPredicted RBP22.89■■□□□ 1.25
CHRNA3-207ENST00000559941 EP400NLQ6ZTU2 488 aa22.89■■□□□ 1.25
CHRNA3-207ENST00000559941 OTUD6AQ7L8S5 288 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms