RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 TARBP2Q15633 366 aaKnown RBP13.79□□□□□ -0.2
SPG11-219ENST00000559822 UGCGQ16739 394 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 INF2Q27J81 1249 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 LETM2Q2VYF4 491 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 FAM102BQ5T8I3 360 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 ERICH6BQ5W0A0 696 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 PDE12Q6L8Q7 609 aaKnown RBP13.79□□□□□ -0.2
SPG11-219ENST00000559822 THNSL1Q8IYQ7 743 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 LRRC43Q8N309 656 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 ETNPPLQ8TBG4 499 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 NLRP7Q8WX94 980 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 FAM20AQ96MK3 541 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 IGFLR1Q9H665 355 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 DACT1Q9NYF0 836 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 PFKFB2O60825 505 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 GPR37L1O60883 481 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 PSMC5P62195 406 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 SCRN1Q12765 414 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 ADAM15Q13444 863 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 NPY5RQ15761 445 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 SMAD2Q15796 467 aaKnown RBP13.78□□□□□ -0.2
SPG11-219ENST00000559822 MTERF2Q49AM1 385 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 PPP4R3AQ6IN85 833 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 B3GNT9Q6UX72 402 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 NEK8Q86SG6 692 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 ADHFE1Q8IWW8 467 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 EXOC8Q8IYI6 725 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 EFHBQ8N7U6 833 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 MICAL1Q8TDZ2 1067 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 RSPH1Q8WYR4 309 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 GJA10Q969M2 543 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 AIFM3Q96NN9 605 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 LRFN3Q9BTN0 628 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 PHF20Q9BVI0 1012 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 GCOM2Q9BZD3 368 aaPredicted RBP13.78□□□□□ -0.2
SPG11-219ENST00000559822 INO80BQ9C086 356 aaPredicted RBP13.78□□□□□ -0.2
SPG11-219ENST00000559822 BRMS1Q9HCU9 246 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 TLR9Q9NR96 1032 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 PPP4R2Q9NY27 417 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 PUF60Q9UHX1 559 aaKnown RBP13.78□□□□□ -0.2
SPG11-219ENST00000559822 CD207Q9UJ71 328 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 KCNJ14Q9UNX9 436 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 LZTS1Q9Y250 596 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 HCN4Q9Y3Q4 1203 aa13.78□□□□□ -0.2
SPG11-219ENST00000559822 TBX3O15119 743 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 MBTPS2O43462 519 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 MARCH6O60337 910 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 TBX10O75333 385 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 FGF18O76093 207 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 FGFR1P11362 822 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 SFPQP23246 707 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPG11-219ENST00000559822 DNAJB1P25685 340 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 PPM1AP35813 382 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 ZP2Q05996 745 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 PPP2R5CQ13362 524 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 ZNF410Q86VK4 478 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 ECHDC2Q86YB7 292 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 COLGALT1Q8NBJ5 622 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 CDCA3Q99618 268 aaPredicted RBP13.77□□□□□ -0.21
SPG11-219ENST00000559822 MRPL9Q9BYD2 267 aaKnown RBP13.77□□□□□ -0.21
SPG11-219ENST00000559822 CHST12Q9NRB3 414 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 TYW1Q9NV66 732 aaKnown RBP13.77□□□□□ -0.21
SPG11-219ENST00000559822 TPCN1Q9ULQ1 816 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 PPME1Q9Y570 386 aa13.77□□□□□ -0.21
SPG11-219ENST00000559822 IGKV6-21A0A0C4DH24 114 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 A0A0U1RQF3 1178 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 CARNS1A5YM72 827 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 DDX11L8A8MPP1 907 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 SLC37A4O43826 429 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 CCNT1O60563 726 aaKnown RBP13.76□□□□□ -0.21
SPG11-219ENST00000559822 MAFO75444 373 aaPredicted RBP13.76□□□□□ -0.21
SPG11-219ENST00000559822 EOMESO95936 686 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 SRGAP2BP0DMP2 458 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 SKIP12755 728 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 IRS1P35568 1242 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 QARSP47897 775 aaKnown RBP13.76□□□□□ -0.21
SPG11-219ENST00000559822 NRIP1P48552 1158 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 PLCB3Q01970 1234 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 DLX2Q07687 328 aaPredicted RBP13.76□□□□□ -0.21
SPG11-219ENST00000559822 CLUL1Q15846 466 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 SLC7A3Q8WY07 619 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 ZNF558Q96NG5 402 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 TLE6Q9H808 572 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 KCNMB3Q9NPA1 279 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 ORC3Q9UBD5 711 aaPredicted RBP13.76□□□□□ -0.21
SPG11-219ENST00000559822 PLXNA4Q9HCM2 1894 aa13.76□□□□□ -0.21
SPG11-219ENST00000559822 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
SPG11-219ENST00000559822 LINC01565O15544 149 aa13.75□□□□□ -0.21
SPG11-219ENST00000559822 DCXO43602 365 aa13.75□□□□□ -0.21
SPG11-219ENST00000559822 BAG4O95429 457 aaKnown RBP13.75□□□□□ -0.21
SPG11-219ENST00000559822 EYA4O95677 639 aa13.75□□□□□ -0.21
SPG11-219ENST00000559822 P4HBP07237 508 aaKnown RBP13.75□□□□□ -0.21
SPG11-219ENST00000559822 GTF2F1P35269 517 aaKnown RBP eCLIP13.75□□□□□ -0.21
SPG11-219ENST00000559822 KRT17Q04695 432 aa13.75□□□□□ -0.21
SPG11-219ENST00000559822 COASYQ13057 564 aa13.75□□□□□ -0.21
SPG11-219ENST00000559822 PIK3AP1Q6ZUJ8 805 aa13.75□□□□□ -0.21
SPG11-219ENST00000559822 ADGRD2Q7Z7M1 963 aa13.75□□□□□ -0.21
SPG11-219ENST00000559822 RHPN2Q8IUC4 686 aa13.75□□□□□ -0.21
SPG11-219ENST00000559822 SLFN12Q8IYM2 578 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms