RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 KDM3AQ9Y4C1 1321 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 A0A1B0GVL5 298 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 MAGEB2O15479 319 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 USO1O60763 962 aaKnown RBP10.07□□□□□ -0.8
HMG20A-209ENST00000559728 NBNO60934 754 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 GADD45BO75293 160 aaPredicted RBP10.07□□□□□ -0.8
HMG20A-209ENST00000559728 IQCF3P0C7M6 154 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 PLA2G4BP0C869 781 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 PFKFB1P16118 471 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 CYP11B2P19099 503 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 ARL2P36404 184 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 RFC5P40937 340 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 EPHB4P54760 987 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 CCL23P55773 120 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 TBC1D8BQ0IIM8 1120 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 MCM6Q14566 821 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 EMC2Q15006 297 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 ZRSR1Q15695 479 aaKnown RBP10.07□□□□□ -0.8
HMG20A-209ENST00000559728 PADI6Q6TGC4 694 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 C16orf59Q7L2K0 433 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 ENGASEQ8NFI3 743 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 CAGE1Q8TC20 777 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 ASAP3Q8TDY4 903 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 TMEM40Q8WWA1 233 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 RAD54LQ92698 747 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 DPF3Q92784 378 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 TMEM143Q96AN5 459 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 SCLYQ96I15 445 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 PPP1R12CQ9BZL4 782 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 NT5C3AQ9H0P0 336 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 FAM49AQ9H0Q0 323 aaPredicted RBP10.07□□□□□ -0.8
HMG20A-209ENST00000559728 HIPK3Q9H422 1215 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 POLD4Q9HCU8 107 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 DNM3Q9UQ16 869 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 MYH15Q9Y2K3 1946 aa10.07□□□□□ -0.8
HMG20A-209ENST00000559728 NPHP3-ACAD11A0A0J9YXS1 232 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 H0YGN5 161 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 ACTN4O43707 911 aaKnown RBP10.06□□□□□ -0.8
HMG20A-209ENST00000559728 CAND2O75155 1236 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 DGAT1O75907 488 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 VTNP04004 478 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 HOXB3P14651 431 aaPredicted RBP10.06□□□□□ -0.8
HMG20A-209ENST00000559728 SELPP16109 830 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 THPOP40225 353 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 GPC3P51654 580 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 NDUFA8P51970 172 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 TMEM62Q0P6H9 643 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 MFSD5Q6N075 450 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 KSR1Q8IVT5 923 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 PDILTQ8N807 584 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 BSNDQ8WZ55 320 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 BADQ92934 168 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 CALML4Q96GE6 196 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 SUGCTQ9HAC7 445 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 PRDM5Q9NQX1 630 aaPredicted RBP10.06□□□□□ -0.8
HMG20A-209ENST00000559728 STK17AQ9UEE5 414 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 KCNH3Q9ULD8 1083 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 NOD1Q9Y239 953 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 CDY2AQ9Y6F7 541 aa10.06□□□□□ -0.8
HMG20A-209ENST00000559728 ARHGEF35A5YM69 484 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 MYMKA6NI61 221 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 POLR2DO15514 142 aaKnown RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 CXCL10P02778 98 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 CTSHP09668 335 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 CSF2RAP15509 400 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 GLRA2P23416 452 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 GUCY2CP25092 1073 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 POLGP54098 1239 aaPredicted RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 MRPS6P82932 125 aaKnown RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 MLLT1Q03111 559 aaPredicted RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 BFSP2Q13515 415 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 SNW1Q13573 536 aaKnown RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 LONRF3Q496Y0 759 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 RRAGBQ5VZM2 374 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 LRRC8DQ7L1W4 858 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 FMR1NBQ8N0W7 255 aaPredicted RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 NME8Q8N427 588 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 METTL13Q8N6R0 699 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 PRPF31Q8WWY3 499 aaKnown RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 SLC7A3Q8WY07 619 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 LARP4BQ92615 738 aaKnown RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 DNAJC19Q96DA6 116 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 ZNF668Q96K58 619 aaPredicted RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 FIZ1Q96SL8 496 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 GDF15Q99988 308 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 CELF4Q9BZC1 486 aaKnown RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 PRO3102Q9H379 93 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 AGO3Q9H9G7 860 aaKnown RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 ATP6V0A4Q9HBG4 840 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 KBTBD4Q9NVX7 518 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 SUCLA2Q9P2R7 463 aaPredicted RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 RANBP2P49792 3224 aaKnown RBP10.05□□□□□ -0.8
HMG20A-209ENST00000559728 ADGRA3Q8IWK6 1321 aa10.05□□□□□ -0.8
HMG20A-209ENST00000559728 RSPH10B2B2RC85 870 aa10.04□□□□□ -0.8
HMG20A-209ENST00000559728 GAS2O43903 313 aaKnown RBP10.04□□□□□ -0.8
HMG20A-209ENST00000559728 HIP1RO75146 1068 aa10.04□□□□□ -0.8
HMG20A-209ENST00000559728 RSPH10BP0C881 870 aa10.04□□□□□ -0.8
HMG20A-209ENST00000559728 RAG1P15918 1043 aa10.04□□□□□ -0.8
HMG20A-209ENST00000559728 LIG1P18858 919 aa10.04□□□□□ -0.8
HMG20A-209ENST00000559728 MAGEA10P43363 369 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms