RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 SMAP1Q8IYB5 467 aaPredicted RBP12.57□□□□□ -0.4
HERC1-204ENST00000559715 FEZF2Q8TBJ5 459 aa12.57□□□□□ -0.4
HERC1-204ENST00000559715 MRPS27Q92552 414 aaKnown RBP12.57□□□□□ -0.4
HERC1-204ENST00000559715 CDCA3Q99618 268 aaPredicted RBP12.57□□□□□ -0.4
HERC1-204ENST00000559715 ZNF577Q9BSK1 485 aa12.57□□□□□ -0.4
HERC1-204ENST00000559715 TMEM117Q9H0C3 514 aa12.57□□□□□ -0.4
HERC1-204ENST00000559715 GABBR1Q9UBS5 961 aa12.57□□□□□ -0.4
HERC1-204ENST00000559715 DENND4AQ7Z401 1863 aa12.57□□□□□ -0.4
HERC1-204ENST00000559715 MSH4O15457 936 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 EIF4BP23588 611 aaKnown RBP12.56□□□□□ -0.4
HERC1-204ENST00000559715 VCPP55072 806 aaKnown RBP12.56□□□□□ -0.4
HERC1-204ENST00000559715 RNF20Q5VTR2 975 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 PDE12Q6L8Q7 609 aaKnown RBP12.56□□□□□ -0.4
HERC1-204ENST00000559715 EFCAB12Q6NXP0 572 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 ANKRD54Q6NXT1 300 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 KCNT2Q6UVM3 1135 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 ECHDC2Q86YB7 292 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 LRRC71Q8N4P6 559 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 METTL13Q8N6R0 699 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 MICAL1Q8TDZ2 1067 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 PHKBQ93100 1093 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 GJA10Q969M2 543 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 PBXIP1Q96AQ6 731 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 ZNF668Q96K58 619 aaPredicted RBP12.56□□□□□ -0.4
HERC1-204ENST00000559715 RPGRIP1Q96KN7 1286 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 ATP6V0A4Q9HBG4 840 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 DNAH14Q0VDD8 3507 aa12.56□□□□□ -0.4
HERC1-204ENST00000559715 IGKV6-21A0A0C4DH24 114 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 A0A0U1RQF3 1178 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 M0R2N6 131 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 MAGEB2O15479 319 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 CSDE1O75534 798 aaKnown RBP12.55□□□□□ -0.4
HERC1-204ENST00000559715 PDGFBP01127 241 aaPredicted RBP12.55□□□□□ -0.4
HERC1-204ENST00000559715 CENPBP07199 599 aaPredicted RBP12.55□□□□□ -0.4
HERC1-204ENST00000559715 PSAPP07602 524 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 DARSP14868 501 aaKnown RBP12.55□□□□□ -0.4
HERC1-204ENST00000559715 LAG3P18627 525 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 FGFR4P22455 802 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 GPC3P51654 580 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 EVCP57679 992 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 SIGLEC14Q08ET2 396 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 NPY5RQ15761 445 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 PRR16Q569H4 304 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 PLPP4Q5VZY2 271 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 Q6ZUG5 572 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 TRMT1LQ7Z2T5 733 aaKnown RBP12.55□□□□□ -0.4
HERC1-204ENST00000559715 TMEM173Q86WV6 379 aaPredicted RBP12.55□□□□□ -0.4
HERC1-204ENST00000559715 THNSL1Q8IYQ7 743 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 REXO1Q8N1G1 1221 aaKnown RBP12.55□□□□□ -0.4
HERC1-204ENST00000559715 SLC39A11Q8N1S5 342 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 FBXL6Q8N531 539 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 MRPL43Q8N983 215 aaKnown RBP12.55□□□□□ -0.4
HERC1-204ENST00000559715 SLC5A5Q92911 643 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 TCF25Q9BQ70 676 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 AAASQ9NRG9 546 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 SNX14Q9Y5W7 946 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 C2orf16Q68DN1 1984 aa12.55□□□□□ -0.4
HERC1-204ENST00000559715 TMEM150BA6NC51 233 aa12.54□□□□□ -0.4
HERC1-204ENST00000559715 C2orf71A6NGG8 1288 aa12.54□□□□□ -0.4
HERC1-204ENST00000559715 B4GALT3O60512 393 aa12.54□□□□□ -0.4
HERC1-204ENST00000559715 PSMD10O75832 226 aa12.54□□□□□ -0.4
HERC1-204ENST00000559715 TECP42680 631 aa12.54□□□□□ -0.4
HERC1-204ENST00000559715 METAP2P50579 478 aaKnown RBP eCLIP12.54□□□□□ -0.4
HERC1-204ENST00000559715 SETQ01105 290 aaPredicted RBP12.54□□□□□ -0.4
HERC1-204ENST00000559715 PTPN21Q16825 1174 aa12.54□□□□□ -0.4
HERC1-204ENST00000559715 ODR4Q5SWX8 454 aa12.54□□□□□ -0.4
HERC1-204ENST00000559715 CKAP2LQ8IYA6 745 aa12.54□□□□□ -0.4
HERC1-204ENST00000559715 BRF1Q92994 677 aa12.54□□□□□ -0.4
HERC1-204ENST00000559715 NGRNQ9NPE2 291 aaKnown RBP12.54□□□□□ -0.4
HERC1-204ENST00000559715 DISC1Q9NRI5 854 aa12.54□□□□□ -0.4
HERC1-204ENST00000559715 CACNA1AO00555 2505 aa12.54□□□□□ -0.4
HERC1-204ENST00000559715 MEIS3P2A8K0S8 358 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 OATP04181 439 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 IFNAR1P17181 557 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 HSPA4P34932 840 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 USP11P51784 963 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 PRKCEQ02156 737 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 KRT32Q14532 448 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 SPOUT1Q5T280 376 aaKnown RBP12.53□□□□□ -0.4
HERC1-204ENST00000559715 MCTP2Q6DN12 878 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 BCL7CQ8WUZ0 217 aaPredicted RBP12.53□□□□□ -0.4
HERC1-204ENST00000559715 MBOAT7Q96N66 472 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 ZNF558Q96NG5 402 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 RIT2Q99578 217 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 TRAIPQ9BWF2 469 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 APOL5Q9BWW9 433 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 VN1R3Q9BXE9 311 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 NIFKQ9BYG3 293 aaKnown RBP12.53□□□□□ -0.4
HERC1-204ENST00000559715 UNC45AQ9H3U1 944 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 C6orf50Q9HD87 102 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 SPG21Q9NZD8 308 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 HCFC2Q9Y5Z7 792 aa12.53□□□□□ -0.4
HERC1-204ENST00000559715 CYP3A7-CYP3A51PA0A087WV96 503 aa12.52□□□□□ -0.41
HERC1-204ENST00000559715 FSD2A1L4K1 749 aa12.52□□□□□ -0.41
HERC1-204ENST00000559715 WDR64B1ANS9 1081 aa12.52□□□□□ -0.41
HERC1-204ENST00000559715 CLASP2O75122 1294 aaKnown RBP12.52□□□□□ -0.41
HERC1-204ENST00000559715 EOMESO95936 686 aa12.52□□□□□ -0.41
HERC1-204ENST00000559715 HMGB1P09429 215 aaKnown RBP12.52□□□□□ -0.41
HERC1-204ENST00000559715 HOXB8P17481 243 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms