RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, human

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSEN1-224	ENST00000559361	NDUFV1	P49821	464 aa		18.86	■□□□□ 0.61
PSEN1-224	ENST00000559361	FBXO47	Q5MNV8	452 aa		18.86	■□□□□ 0.61
PSEN1-224	ENST00000559361	LINC01599	Q8WXQ3	324 aa		18.86	■□□□□ 0.61
PSEN1-224	ENST00000559361	RIT2	Q99578	217 aa		18.86	■□□□□ 0.61
PSEN1-224	ENST00000559361	KCNMB3	Q9NPA1	279 aa		18.86	■□□□□ 0.61
PSEN1-224	ENST00000559361	TCEAL9	Q9UHQ7	104 aa		18.86	■□□□□ 0.61
PSEN1-224	ENST00000559361	NFASC	O94856	1347 aa		18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	IPO5	O00410	1097 aa	Known RBP	18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	ATP2B1	P20020	1258 aa		18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	PRPH	P41219	470 aa		18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	CALCRL	Q16602	461 aa		18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	UTP14C	Q5TAP6	766 aa	Known RBP	18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	ADGRD2	Q7Z7M1	963 aa		18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	RTN4RL1	Q86UN2	441 aa	Predicted RBP	18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	CMTR2	Q8IYT2	770 aa	Known RBP	18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	CYP2W1	Q8TAV3	490 aa		18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	ETNPPL	Q8TBG4	499 aa		18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	PPP2R3C	Q969Q6	453 aa		18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	SDF4	Q9BRK5	362 aa		18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	ZNF577	Q9BSK1	485 aa		18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	AGO3	Q9H9G7	860 aa	Known RBP	18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	AGO4	Q9HCK5	861 aa	Known RBP	18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	MRPL42	Q9Y6G3	142 aa	Known RBP	18.85	■□□□□ 0.61
PSEN1-224	ENST00000559361	SLC37A4	O43826	429 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	MARCH6	O60337	910 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	GLP2R	O95838	553 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	KRT85	P78386	507 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	ZNF174	Q15697	407 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	MARCH8	Q5T0T0	291 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	FOXD4L5	Q5VV16	416 aa	Predicted RBP	18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	ARL6IP4	Q66PJ3	421 aa	Known RBP	18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	TSHZ1	Q6ZSZ6	1077 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	FBXL6	Q8N531	539 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	SLC5A5	Q92911	643 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	PCDHB6	Q9Y5E3	794 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	SQOR	Q9Y6N5	450 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	MYO10	Q9HD67	2058 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	DMD	P11532	3685 aa		18.84	■□□□□ 0.61
PSEN1-224	ENST00000559361	MSH4	O15457	936 aa		18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	YEATS4	O95619	227 aa		18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	OR52Z1	P0C646	297 aa		18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	KCNA2	P16389	499 aa		18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	NASP	P49321	788 aa	Predicted RBP	18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	ATP2C1	P98194	919 aa	Predicted RBP	18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	RSPH3	Q86UC2	560 aa		18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	POTED	Q86YR6	584 aa		18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	KLHL23	Q8NBE8	558 aa		18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	DNAJB3	Q8WWF6	145 aa		18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	CDY2A	Q9Y6F7	541 aa		18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	PLXNA4	Q9HCM2	1894 aa		18.83	■□□□□ 0.6
PSEN1-224	ENST00000559361	GAS7	O60861	476 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	AR	P10275	920 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	TCF7	P36402	384 aa	Predicted RBP	18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	SIGLEC14	Q08ET2	396 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	PPFIA1	Q13136	1202 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	PTGDR	Q13258	359 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	SF3A1	Q15459	793 aa	Known RBP	18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	GRIK4	Q16099	956 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	NPAS4	Q8IUM7	802 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	SUGP1	Q8IWZ8	645 aa	Known RBP	18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	KCNG4	Q8TDN1	519 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	POF1B	Q8WVV4	589 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	ASIC4	Q96FT7	647 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	MTMR9	Q96QG7	549 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	PHF7	Q9BWX1	381 aa	Predicted RBP	18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	FTHL17	Q9BXU8	183 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	RAB34	Q9BZG1	259 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	TUBE1	Q9UJT0	475 aa		18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	USP15	Q9Y4E8	981 aa	Predicted RBP	18.82	■□□□□ 0.6
PSEN1-224	ENST00000559361	GSTTP1	A0A1W2PQM5	241 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	WNT7A	O00755	349 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	ATP9A	O75110	1047 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	CSPG5	O95196	566 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	RPLP2	P05387	115 aa	Known RBP	18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	CD52	P31358	61 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	NRIP1	P48552	1158 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	KRT76	Q01546	638 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	NBR1	Q14596	966 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	TMEM266	Q2M3C6	531 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	LRCH2	Q5VUJ6	765 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	FAM173B	Q6P4H8	233 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	RDM1	Q8NG50	284 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	SUSD6	Q92537	303 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	USP28	Q96RU2	1077 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	TEKT3	Q9BXF9	490 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	JPH1	Q9HDC5	661 aa	Predicted RBP	18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	ERAP1	Q9NZ08	941 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	STK24	Q9Y6E0	443 aa		18.81	■□□□□ 0.6
PSEN1-224	ENST00000559361	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	18.8	■□□□□ 0.6
PSEN1-224	ENST00000559361	PPP6R2	O75170	966 aa		18.8	■□□□□ 0.6
PSEN1-224	ENST00000559361	PSMD10	O75832	226 aa		18.8	■□□□□ 0.6
PSEN1-224	ENST00000559361	ATF7	P17544	494 aa	Predicted RBP	18.8	■□□□□ 0.6
PSEN1-224	ENST00000559361	SFN	P31947	248 aa		18.8	■□□□□ 0.6
PSEN1-224	ENST00000559361	MRPS6	P82932	125 aa	Known RBP	18.8	■□□□□ 0.6
PSEN1-224	ENST00000559361	SP4	Q02446	784 aa		18.8	■□□□□ 0.6
PSEN1-224	ENST00000559361	DNM1	Q05193	864 aa	Known RBP	18.8	■□□□□ 0.6
PSEN1-224	ENST00000559361	SLC39A14	Q15043	492 aa		18.8	■□□□□ 0.6
PSEN1-224	ENST00000559361	ZNF746	Q6NUN9	644 aa	Predicted RBP	18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms