RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 AK2P54819 239 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 NLRP11P59045 1033 aaKnown RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 NLRP5P59047 1200 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 ERVFC1P60507 584 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 PRKCEQ02156 737 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 ZP2Q05996 745 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 NFX1Q12986 1120 aaKnown RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 ME3Q16798 604 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 PAN2Q504Q3 1202 aaKnown RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 NAALADL2Q58DX5 795 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 LRCH2Q5VUJ6 765 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 PTCRAQ6ISU1 281 aaPredicted RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 SLC24A5Q71RS6 500 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 TRMT1LQ7Z2T5 733 aaKnown RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 LRRC71Q8N4P6 559 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 VN1R2Q8NFZ6 395 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 CASD1Q96PB1 797 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 SH2D3AQ9BRG2 576 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 LRFN3Q9BTN0 628 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 C11orf84Q9BUA3 381 aaPredicted RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 ELAC1Q9H777 363 aaKnown RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 C1orf112Q9NSG2 853 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 PDRG1Q9NUG6 133 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 TYW1Q9NV66 732 aaKnown RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 TMEM161AQ9NX61 479 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 DAXXQ9UER7 740 aaPredicted RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 CEP131Q9UPN4 1083 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 GINS2Q9Y248 185 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 M0QZ92 97 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 FSCN2O14926 492 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 GPR182O15218 404 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 MBTPS2O43462 519 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 CHMP2AO43633 222 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 GAS7O60861 476 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 GPR37L1O60883 481 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 CSDE1O75534 798 aaKnown RBP6.25□□□□□ -1.41
SMAD3-209ENST00000558894 STAG3L1P0CL83 205 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 DARSP14868 501 aaKnown RBP6.25□□□□□ -1.41
SMAD3-209ENST00000558894 FGFR4P22455 802 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 ANAPC15P60006 121 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 RBM10P98175 930 aaKnown RBP6.25□□□□□ -1.41
SMAD3-209ENST00000558894 AKAP17AQ02040 695 aaKnown RBP6.25□□□□□ -1.41
SMAD3-209ENST00000558894 PPP2R5CQ13362 524 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 NONOQ15233 471 aaKnown RBP eCLIP6.25□□□□□ -1.412e-8■■■■■ 28.2
SMAD3-209ENST00000558894 SMAD2Q15796 467 aaKnown RBP6.25□□□□□ -1.41
SMAD3-209ENST00000558894 INF2Q27J81 1249 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 XKR3Q5GH77 459 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 CLLU1OSQ5K130 101 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 PPP4R3AQ6IN85 833 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 GALNT17Q6IS24 598 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 KSR1Q8IVT5 923 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 CKAP2LQ8IYA6 745 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 TRIM22Q8IYM9 498 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 GJD3Q8N144 294 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 METTL13Q8N6R0 699 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 RDM1Q8NG50 284 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 POF1BQ8WVV4 589 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 ZNF668Q96K58 619 aaPredicted RBP6.25□□□□□ -1.41
SMAD3-209ENST00000558894 FAM167AQ96KS9 214 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 TRAIPQ9BWF2 469 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 TEKT3Q9BXF9 490 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 IFT122Q9HBG6 1241 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 NRBP2Q9NSY0 501 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 CLDND1Q9NY35 253 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 SAMM50Q9Y512 469 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 PCDHB7Q9Y5E2 793 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 ZNF318Q5VUA4 2279 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 CFAP54Q96N23 3096 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 DMDP11532 3685 aa6.25□□□□□ -1.41
SMAD3-209ENST00000558894 MTCL1Q9Y4B5 1905 aaKnown RBP6.25□□□□□ -1.41
SMAD3-209ENST00000558894 TRIP11Q15643 1979 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 A0A087WZ62 844 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 A0A0U1RQF3 1178 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 DENND3A2RUS2 1198 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 TBKBP1A7MCY6 615 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 MEIS3P2A8K0S8 358 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 ZBTB39O15060 712 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 B4GALT3O60512 393 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 FGF18O76093 207 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 EYA4O95677 639 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 NPEPPSP55786 919 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 PLCB3Q01970 1234 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 COASYQ13057 564 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 NR5A1Q13285 461 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 LETM2Q2VYF4 491 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 PUS10Q3MIT2 529 aaKnown RBP6.24□□□□□ -1.41
SMAD3-209ENST00000558894 MTERF2Q49AM1 385 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 PLA2G4FQ68DD2 849 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 TMEM184AQ6ZMB5 413 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 MIER3Q7Z3K6 550 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 KRT25Q7Z3Z0 450 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 ECHDC2Q86YB7 292 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 EFHBQ8N7U6 833 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 NECAB1Q8N987 351 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 COLGALT1Q8NBJ5 622 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 IL27Q8NEV9 243 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 GTF3C6Q969F1 213 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 FDXACB1Q9BRP7 624 aaPredicted RBP6.24□□□□□ -1.41
SMAD3-209ENST00000558894 C1QTNF1Q9BXJ1 281 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 C22orf23Q9BZE7 217 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms