RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 A0A087WWV3 80 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 DENND3A2RUS2 1198 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 MED24O75448 989 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 CSDE1O75534 798 aaKnown RBP12.3□□□□□ -0.44
PBX1-213ENST00000558796 FGFR4P22455 802 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 IGFBP4P22692 258 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 DNM2P50570 870 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 EMC2Q15006 297 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 OTUD6AQ7L8S5 288 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 RHPN2Q8IUC4 686 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 KSR1Q8IVT5 923 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 C4orf32Q8N8J7 132 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 GDPD5Q8WTR4 605 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 TMEM143Q96AN5 459 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 NLRP4Q96MN2 994 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 CCDC43Q96MW1 224 aaKnown RBP12.3□□□□□ -0.44
PBX1-213ENST00000558796 HSD17B14Q9BPX1 270 aa12.3□□□□□ -0.44
PBX1-213ENST00000558796 SUCLA2Q9P2R7 463 aaPredicted RBP12.3□□□□□ -0.44
PBX1-213ENST00000558796 TDRD15B5MCY1 1934 aaKnown RBP12.3□□□□□ -0.44
PBX1-213ENST00000558796 A0A087WZ62 844 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 VPS37CA5D8V6 355 aaPredicted RBP12.29□□□□□ -0.44
PBX1-213ENST00000558796 K7ELQ4 463 aaPredicted RBP12.29□□□□□ -0.44
PBX1-213ENST00000558796 GPR182O15218 404 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 SPATA31C1P0DKV0 1188 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 DARSP14868 501 aaKnown RBP12.29□□□□□ -0.44
PBX1-213ENST00000558796 EIF4BP23588 611 aaKnown RBP12.29□□□□□ -0.44
PBX1-213ENST00000558796 RFC5P40937 340 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 PTGDRQ13258 359 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 ODR4Q5SWX8 454 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 POTEGQ6S5H5 508 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 MICALL1Q8N3F8 863 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 SP7Q8TDD2 431 aaPredicted RBP12.29□□□□□ -0.44
PBX1-213ENST00000558796 PIGOQ8TEQ8 1089 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 TGS1Q96RS0 853 aaKnown RBP12.29□□□□□ -0.44
PBX1-213ENST00000558796 ADAM2Q99965 735 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 JPH2Q9BR39 696 aaPredicted RBP12.29□□□□□ -0.44
PBX1-213ENST00000558796 FDXACB1Q9BRP7 624 aaPredicted RBP12.29□□□□□ -0.44
PBX1-213ENST00000558796 C17orf80Q9BSJ5 609 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 DHX33Q9H6R0 707 aaKnown RBP12.29□□□□□ -0.44
PBX1-213ENST00000558796 ADGRA3Q8IWK6 1321 aa12.29□□□□□ -0.44
PBX1-213ENST00000558796 LYPLA2O95372 231 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 GATMP50440 423 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
PBX1-213ENST00000558796 ERVK-21P61565 698 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 PAN2Q504Q3 1202 aaKnown RBP12.28□□□□□ -0.44
PBX1-213ENST00000558796 RILPL1Q5EBL4 403 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 FERMT3Q86UX7 667 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 CATSPER3Q86XQ3 398 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 NPAS4Q8IUM7 802 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 ERMNQ8TAM6 284 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 PSPC1Q8WXF1 523 aaKnown RBP12.28□□□□□ -0.44
PBX1-213ENST00000558796 PPM1EQ8WY54 764 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 MTRQ99707 1265 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 GCOM2Q9BZD3 368 aaPredicted RBP12.28□□□□□ -0.44
PBX1-213ENST00000558796 RC3H2Q9HBD1 1191 aaKnown RBP12.28□□□□□ -0.44
PBX1-213ENST00000558796 ATP6V0A4Q9HBG4 840 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 TUFT1Q9NNX1 390 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 XPNPEP1Q9NQW7 623 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.28□□□□□ -0.44
PBX1-213ENST00000558796 LRFN2Q9ULH4 789 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 PPME1Q9Y570 386 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
PBX1-213ENST00000558796 TRIP11Q15643 1979 aa12.27□□□□□ -0.44
PBX1-213ENST00000558796 PP2D1A8MPX8 630 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 USO1O60763 962 aaKnown RBP12.27□□□□□ -0.45
PBX1-213ENST00000558796 CCT6AP40227 531 aaKnown RBP12.27□□□□□ -0.45
PBX1-213ENST00000558796 SARSP49591 514 aaKnown RBP12.27□□□□□ -0.45
PBX1-213ENST00000558796 RARRES1P49788 294 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 GRB10Q13322 594 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 DSC3Q14574 896 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 CCDC85BQ15834 202 aaPredicted RBP12.27□□□□□ -0.45
PBX1-213ENST00000558796 HAUS3Q68CZ6 603 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 ZNF410Q86VK4 478 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 EXOC8Q8IYI6 725 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 PRPF31Q8WWY3 499 aaKnown RBP12.27□□□□□ -0.45
PBX1-213ENST00000558796 POLR3CQ9BUI4 534 aaPredicted RBP12.27□□□□□ -0.45
PBX1-213ENST00000558796 RGS18Q9NS28 235 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 C1orf112Q9NSG2 853 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 ANKEF1Q9NU02 776 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 LRWD1Q9UFC0 647 aa12.27□□□□□ -0.45
PBX1-213ENST00000558796 XIRP2A4UGR9 3374 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 C9IYK1 514 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 LAD1O00515 517 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 GAS2O43903 313 aaKnown RBP12.26□□□□□ -0.45
PBX1-213ENST00000558796 LPXNO60711 386 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 DGKIO75912 1065 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 STAG3L1P0CL83 205 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 SRGAP2CP0DJJ0 459 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 SFPQP23246 707 aaKnown RBP eCLIP12.26□□□□□ -0.45
PBX1-213ENST00000558796 RPA1P27694 616 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 CTNNB1P35222 781 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 ATP2C1P98194 919 aaPredicted RBP12.26□□□□□ -0.45
PBX1-213ENST00000558796 LAMTOR4Q0VGL1 99 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 BTG3Q14201 252 aaPredicted RBP12.26□□□□□ -0.45
PBX1-213ENST00000558796 IL17AQ16552 155 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 ECM1Q16610 540 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 SLC24A5Q71RS6 500 aa12.26□□□□□ -0.45
PBX1-213ENST00000558796 CRIPAKQ8N1N5 446 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms