RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 FOSBP53539 338 aa17.38■□□□□ 0.37
CSHL1-208ENST00000558609 AAK1Q2M2I8 961 aa17.38■□□□□ 0.37
CSHL1-208ENST00000558609 HLA-CQ95604 372 aa17.38■□□□□ 0.37
CSHL1-208ENST00000558609 SH2D3AQ9BRG2 576 aa17.38■□□□□ 0.37
CSHL1-208ENST00000558609 CYP26B1Q9NR63 512 aa17.38■□□□□ 0.37
CSHL1-208ENST00000558609 PPME1Q9Y570 386 aa17.38■□□□□ 0.37
CSHL1-208ENST00000558609 BRWD1Q9NSI6 2320 aa17.38■□□□□ 0.37
CSHL1-208ENST00000558609 NCOR1O75376 2440 aa17.38■□□□□ 0.37
CSHL1-208ENST00000558609 KCNQ1P51787 676 aa17.37■□□□□ 0.37
CSHL1-208ENST00000558609 HMGN5P82970 282 aaKnown RBP17.37■□□□□ 0.37
CSHL1-208ENST00000558609 DRP2Q13474 957 aa17.37■□□□□ 0.37
CSHL1-208ENST00000558609 SAFBQ15424 915 aaKnown RBP eCLIP17.37■□□□□ 0.37
CSHL1-208ENST00000558609 C4orf19Q8IY42 314 aa17.37■□□□□ 0.37
CSHL1-208ENST00000558609 JPH2Q9BR39 696 aaPredicted RBP17.37■□□□□ 0.37
CSHL1-208ENST00000558609 C11orf84Q9BUA3 381 aaPredicted RBP17.37■□□□□ 0.37
CSHL1-208ENST00000558609 PLVAPQ9BX97 442 aa17.37■□□□□ 0.37
CSHL1-208ENST00000558609 WRAP73Q9P2S5 460 aaPredicted RBP17.37■□□□□ 0.37
CSHL1-208ENST00000558609 PCDHA12Q9UN75 941 aa17.37■□□□□ 0.37
CSHL1-208ENST00000558609 MRPL42Q9Y6G3 142 aaKnown RBP17.37■□□□□ 0.37
CSHL1-208ENST00000558609 WNT7AO00755 349 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 CALCRLQ16602 461 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 PLA2G4FQ68DD2 849 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 NCAPH2Q6IBW4 605 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 EXOC8Q8IYI6 725 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 IL27Q8NEV9 243 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 NLRP7Q8WX94 980 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 FAM122AQ96E09 287 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 C8orf76Q96K31 380 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 ZNF668Q96K58 619 aaPredicted RBP17.36■□□□□ 0.37
CSHL1-208ENST00000558609 SCLT1Q96NL6 688 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 MTMR9Q96QG7 549 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 LXNQ9BS40 222 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 LMAN2LQ9H0V9 348 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 ELAC1Q9H777 363 aaKnown RBP17.36■□□□□ 0.37
CSHL1-208ENST00000558609 ZSWIM4Q9H7M6 989 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 RGL1Q9NZL6 768 aa17.36■□□□□ 0.37
CSHL1-208ENST00000558609 SUCLA2Q9P2R7 463 aaPredicted RBP17.36■□□□□ 0.37
CSHL1-208ENST00000558609 NEMFO60524 1076 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 ZSCAN20P17040 1043 aaPredicted RBP17.35■□□□□ 0.37
CSHL1-208ENST00000558609 GATMP50440 423 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 NPEPPSP55786 919 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 GUCY1B3Q02153 619 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 RABEP1Q15276 862 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 TIGD5Q53EQ6 642 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 NAALADL2Q58DX5 795 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 OTUD6AQ7L8S5 288 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 ZNF410Q86VK4 478 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 FBXO18Q8NFZ0 1043 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 P2RX5Q93086 422 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 DYDC2Q96IM9 177 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 CEP170P1Q96L14 293 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 HSD17B14Q9BPX1 270 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 GCOM2Q9BZD3 368 aaPredicted RBP17.35■□□□□ 0.37
CSHL1-208ENST00000558609 DHX33Q9H6R0 707 aaKnown RBP17.35■□□□□ 0.37
CSHL1-208ENST00000558609 TTC12Q9H892 705 aaPredicted RBP17.35■□□□□ 0.37
CSHL1-208ENST00000558609 TMEM161AQ9NX61 479 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 MYO7AQ13402 2215 aa17.35■□□□□ 0.37
CSHL1-208ENST00000558609 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.34■□□□□ 0.37
CSHL1-208ENST00000558609 GRM6O15303 877 aa17.34■□□□□ 0.37
CSHL1-208ENST00000558609 SLITRK3O94933 977 aa17.34■□□□□ 0.37
CSHL1-208ENST00000558609 YWHABP31946 246 aaKnown RBP17.34■□□□□ 0.37
CSHL1-208ENST00000558609 RFC5P40937 340 aa17.34■□□□□ 0.37
CSHL1-208ENST00000558609 CTTNQ14247 550 aaKnown RBP17.34■□□□□ 0.37
CSHL1-208ENST00000558609 PAN2Q504Q3 1202 aaKnown RBP17.34■□□□□ 0.37
CSHL1-208ENST00000558609 ZNF579Q8NAF0 562 aaKnown RBP17.34■□□□□ 0.37
CSHL1-208ENST00000558609 SLC7A3Q8WY07 619 aa17.34■□□□□ 0.37
CSHL1-208ENST00000558609 EIF2AK1Q9BQI3 630 aaKnown RBP17.34■□□□□ 0.37
CSHL1-208ENST00000558609 FOXP1Q9H334 677 aaPredicted RBP17.34■□□□□ 0.37
CSHL1-208ENST00000558609 EPHX3Q9H6B9 360 aa17.34■□□□□ 0.37
CSHL1-208ENST00000558609 ATP6V0A4Q9HBG4 840 aa17.34■□□□□ 0.37
CSHL1-208ENST00000558609 PLAGL2Q9UPG8 496 aa17.34■□□□□ 0.37
CSHL1-208ENST00000558609 A0A087WZ62 844 aa17.33■□□□□ 0.36
CSHL1-208ENST00000558609 LYPLA2O95372 231 aa17.33■□□□□ 0.36
CSHL1-208ENST00000558609 IBSPP21815 317 aaPredicted RBP17.33■□□□□ 0.36
CSHL1-208ENST00000558609 TXKP42681 527 aa17.33■□□□□ 0.36
CSHL1-208ENST00000558609 CYP4A11Q02928 519 aa17.33■□□□□ 0.36
CSHL1-208ENST00000558609 FAM102BQ5T8I3 360 aa17.33■□□□□ 0.36
CSHL1-208ENST00000558609 RHPN2Q8IUC4 686 aa17.33■□□□□ 0.36
CSHL1-208ENST00000558609 TPH2Q8IWU9 490 aa17.33■□□□□ 0.36
CSHL1-208ENST00000558609 FAM184AQ8NB25 1140 aa17.33■□□□□ 0.36
CSHL1-208ENST00000558609 NEK9Q8TD19 979 aa17.33■□□□□ 0.36
CSHL1-208ENST00000558609 FDXACB1Q9BRP7 624 aaPredicted RBP17.33■□□□□ 0.36
CSHL1-208ENST00000558609 C1QTNF1Q9BXJ1 281 aa17.33■□□□□ 0.36
CSHL1-208ENST00000558609 INO80BQ9C086 356 aaPredicted RBP17.33■□□□□ 0.36
CSHL1-208ENST00000558609 NSUN3Q9H649 340 aaKnown RBP17.33■□□□□ 0.36
CSHL1-208ENST00000558609 CHST12Q9NRB3 414 aa17.33■□□□□ 0.36
CSHL1-208ENST00000558609 TBKBP1A7MCY6 615 aa17.32■□□□□ 0.36
CSHL1-208ENST00000558609 ZBTB39O15060 712 aa17.32■□□□□ 0.36
CSHL1-208ENST00000558609 GAS2O43903 313 aaKnown RBP17.32■□□□□ 0.36
CSHL1-208ENST00000558609 FGFR4P22455 802 aa17.32■□□□□ 0.36
CSHL1-208ENST00000558609 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
CSHL1-208ENST00000558609 POLGP54098 1239 aaPredicted RBP17.32■□□□□ 0.36
CSHL1-208ENST00000558609 ORC2Q13416 577 aaPredicted RBP17.32■□□□□ 0.36
CSHL1-208ENST00000558609 XKR9Q5GH70 373 aa17.32■□□□□ 0.36
CSHL1-208ENST00000558609 ECHDC2Q86YB7 292 aa17.32■□□□□ 0.36
CSHL1-208ENST00000558609 KSR1Q8IVT5 923 aa17.32■□□□□ 0.36
CSHL1-208ENST00000558609 TMEM60Q9H2L4 133 aa17.32■□□□□ 0.36
CSHL1-208ENST00000558609 UBE2ZQ9H832 354 aaPredicted RBP17.32■□□□□ 0.36
CSHL1-208ENST00000558609 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
CSHL1-208ENST00000558609 DACT1Q9NYF0 836 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms