RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 HAUS3Q68CZ6 603 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 DTHD1Q6ZMT9 781 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.47□□□□□ -0.89
TPM1-213ENST00000558400 ZNF410Q86VK4 478 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 LRRC71Q8N4P6 559 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 KCTD17Q8N5Z5 321 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 C4orf32Q8N8J7 132 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 ATXN2LQ8WWM7 1075 aaKnown RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 ZBTB10Q96DT7 871 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 SNX27Q96L92 541 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 CCDC43Q96MW1 224 aaKnown RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 CEP89Q96ST8 783 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 GAS2L1Q99501 681 aaPredicted RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 C1QTNF1Q9BXJ1 281 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 GCOM2Q9BZD3 368 aaPredicted RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 NKX2-4Q9H2Z4 354 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 DHX33Q9H6R0 707 aaKnown RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 AGO3Q9H9G7 860 aaKnown RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 C1orf112Q9NSG2 853 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 SUCLA2Q9P2R7 463 aaPredicted RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 ST3GAL5Q9UNP4 418 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 YBX2Q9Y2T7 364 aaKnown RBP9.47□□□□□ -0.89
TPM1-213ENST00000558400 BDP1A6H8Y1 2624 aa9.47□□□□□ -0.89
TPM1-213ENST00000558400 TET1Q8NFU7 2136 aa9.46□□□□□ -0.89
TPM1-213ENST00000558400 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.46□□□□□ -0.9
TPM1-213ENST00000558400 WNT7AO00755 349 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 DGAT1O75907 488 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 CA3P07451 260 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 GPC3P51654 580 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 NPEPPSP55786 919 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 DEFB103AP81534 67 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 HTRA4P83105 476 aaPredicted RBP9.46□□□□□ -0.9
TPM1-213ENST00000558400 CYP4A11Q02928 519 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 POU5F1BQ06416 359 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 MXD4Q14582 209 aaPredicted RBP9.46□□□□□ -0.9
TPM1-213ENST00000558400 GRIN2CQ14957 1233 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 PCBP1Q15365 356 aaKnown RBP eCLIP9.46□□□□□ -0.9
TPM1-213ENST00000558400 TCTN1Q2MV58 587 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 SLC24A5Q71RS6 500 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 CATSPER3Q86XQ3 398 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 HSCBQ8IWL3 235 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 NLRP7Q8WX94 980 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 PSPC1Q8WXF1 523 aaKnown RBP9.46□□□□□ -0.9
TPM1-213ENST00000558400 SCLT1Q96NL6 688 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 UHRF1Q96T88 793 aaPredicted RBP9.46□□□□□ -0.9
TPM1-213ENST00000558400 YME1L1Q96TA2 773 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 OSBPL7Q9BZF2 842 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 ADAMTS10Q9H324 1103 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 CDHR5Q9HBB8 845 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 ERVK-5Q9HDB9 667 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.46□□□□□ -0.9
TPM1-213ENST00000558400 CHST12Q9NRB3 414 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 THEGQ9P2T0 379 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 DAXXQ9UER7 740 aaPredicted RBP9.46□□□□□ -0.9
TPM1-213ENST00000558400 LRWD1Q9UFC0 647 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 DBR1Q9UK59 544 aaKnown RBP9.46□□□□□ -0.9
TPM1-213ENST00000558400 NOC2LQ9Y3T9 749 aaKnown RBP9.46□□□□□ -0.9
TPM1-213ENST00000558400 PCDHB6Q9Y5E3 794 aa9.46□□□□□ -0.9
TPM1-213ENST00000558400 DENND3A2RUS2 1198 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 POTEMA6NI47 508 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 UPP2O95045 317 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 HSP90AA1P07900 732 aaKnown RBP9.45□□□□□ -0.9
TPM1-213ENST00000558400 SPATA31C1P0DKV0 1188 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 DARSP14868 501 aaKnown RBP9.45□□□□□ -0.9
TPM1-213ENST00000558400 MYOGP15173 224 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 TAP1Q03518 808 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 NCBP1Q09161 790 aaKnown RBP9.45□□□□□ -0.9
TPM1-213ENST00000558400 KRT79Q5XKE5 535 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 SRGAP1Q7Z6B7 1085 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 RTN4RL1Q86UN2 441 aaPredicted RBP9.45□□□□□ -0.9
TPM1-213ENST00000558400 RHPN2Q8IUC4 686 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 IGSF22Q8N9C0 903 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 SAMD11Q96NU1 681 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 ASB2Q96Q27 587 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 TGS1Q96RS0 853 aaKnown RBP9.45□□□□□ -0.9
TPM1-213ENST00000558400 OSMRQ99650 979 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 MTRQ99707 1265 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 ADAM2Q99965 735 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 ZSCAN16Q9H4T2 348 aaPredicted RBP9.45□□□□□ -0.9
TPM1-213ENST00000558400 ELAC1Q9H777 363 aaKnown RBP9.45□□□□□ -0.9
TPM1-213ENST00000558400 RGS18Q9NS28 235 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 DACT1Q9NYF0 836 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 WRAP73Q9P2S5 460 aaPredicted RBP9.45□□□□□ -0.9
TPM1-213ENST00000558400 LRFN2Q9ULH4 789 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 PCDHB7Q9Y5E2 793 aa9.45□□□□□ -0.9
TPM1-213ENST00000558400 SCN5AQ14524 2016 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 TMEM150BA6NC51 233 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 ZBTB39O15060 712 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 SLC26A4O43511 780 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 SKIP12755 728 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 POU3F3P20264 500 aaPredicted RBP9.44□□□□□ -0.9
TPM1-213ENST00000558400 SYT1P21579 422 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 SFPQP23246 707 aaKnown RBP eCLIP9.44□□□□□ -0.9
TPM1-213ENST00000558400 CCT6AP40227 531 aaKnown RBP9.44□□□□□ -0.9
TPM1-213ENST00000558400 SARSP49591 514 aaKnown RBP9.44□□□□□ -0.9
TPM1-213ENST00000558400 RARRES1P49788 294 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 ERVK-21P61565 698 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 FAM189BP81408 668 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 ATP2C1P98194 919 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms