RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SLC13A4Q9UKG4 626 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 TRIM66O15016 1216 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 HAUS5O94927 633 aa14.91□□□□□ -0.02
SPG11-210ENST00000558319 MXD4Q14582 209 aaPredicted RBP14.91□□□□□ -0.02
SPG11-210ENST00000558319 DALRD3Q5D0E6 543 aaKnown RBP14.91□□□□□ -0.02
SPG11-210ENST00000558319 TDRD3Q9H7E2 651 aaKnown RBP14.91□□□□□ -0.02
SPG11-210ENST00000558319 NCK2O43639 380 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 KIF1CO43896 1103 aaKnown RBP14.9□□□□□ -0.02
SPG11-210ENST00000558319 GH2P01242 217 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 NBPF9Q3BBW0 867 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 RFWD2Q8NHY2 731 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 GIMAP4Q9NUV9 329 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 SATB2Q9UPW6 733 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 UPP2O95045 317 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 WDR75Q8IWA0 830 aaKnown RBP14.9□□□□□ -0.02
SPG11-210ENST00000558319 SMAD5Q99717 465 aaKnown RBP14.9□□□□□ -0.02
SPG11-210ENST00000558319 SH2D3AQ9BRG2 576 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 KIAA0232Q92628 1395 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 E2F8A0AVK6 867 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 CFAP69A5D8W1 941 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 PSMA2P25787 234 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 BBS5Q8N3I7 341 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 SNX19Q92543 992 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 SLC7A5P2Q9GIP4 190 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 TEX14Q8IWB6 1497 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 A0A1W2PQ27 194 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 A0A1W2PQ64 194 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 A0A1W2PQD8 194 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 DENND3A2RUS2 1198 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 LARGE1O95461 756 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 PLA2G4BP0C869 781 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 ADORA2BP29275 332 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 STAT3P40763 770 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 PPP2R2AP63151 447 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 GUCY1A3Q02108 690 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 RHPN2Q8IUC4 686 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 ATP6V0A1Q93050 837 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 LSG1Q9H089 658 aaKnown RBP14.9□□□□□ -0.02
SPG11-210ENST00000558319 LTKP29376 864 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 BTNL9Q6UXG8 535 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 RWDD2AQ9UIY3 292 aa14.9□□□□□ -0.02
SPG11-210ENST00000558319 EDC4Q6P2E9 1401 aaKnown RBP14.9□□□□□ -0.02
SPG11-210ENST00000558319 WDR64B1ANS9 1081 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 E9PMD0 336 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 MRPL28Q13084 256 aaKnown RBP14.89□□□□□ -0.03
SPG11-210ENST00000558319 EMBQ6PCB8 327 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 CATSPER4Q7RTX7 472 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 SNRNP27Q8WVK2 155 aaKnown RBP14.89□□□□□ -0.03
SPG11-210ENST00000558319 NAF1Q96HR8 494 aaKnown RBP14.89□□□□□ -0.03
SPG11-210ENST00000558319 PANX2Q96RD6 677 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 KLC2Q9H0B6 622 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 HDAC6Q9UBN7 1215 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 USP17L5A8MUK1 530 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 ANP32DO95626 131 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 TBCCQ15814 346 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 ANO5Q75V66 913 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 PCSK1NQ9UHG2 260 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 FBXO2Q9UK22 296 aaPredicted RBP14.89□□□□□ -0.03
SPG11-210ENST00000558319 TRIM49BA6NDI0 452 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 RNF219Q5W0B1 726 aaPredicted RBP14.89□□□□□ -0.03
SPG11-210ENST00000558319 ENAHQ8N8S7 591 aaPredicted RBP14.89□□□□□ -0.03
SPG11-210ENST00000558319 OLFM3Q96PB7 478 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 SLC13A1Q9BZW2 595 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 CXorf56Q9H5V9 222 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 ALG13Q9NP73 1137 aaKnown RBP14.89□□□□□ -0.03
SPG11-210ENST00000558319 ZSWIM5Q9P217 1185 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 ZHX2Q9Y6X8 837 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 KRT4P19013 534 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 BPIFB4P59827 614 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 CEP55Q53EZ4 464 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 TWF2Q6IBS0 349 aaKnown RBP14.89□□□□□ -0.03
SPG11-210ENST00000558319 C11orf74Q86VG3 221 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 MB21D1Q8N884 522 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 PIDD1Q9HB75 910 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 PIH1D3Q9NQM4 214 aaKnown RBP14.89□□□□□ -0.03
SPG11-210ENST00000558319 ADAMTS1Q9UHI8 967 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 PIK3C2GO75747 1445 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 ARHGAP10A1A4S6 786 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 CCDC15Q0P6D6 951 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 KLC3Q6P597 504 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.89□□□□□ -0.03
SPG11-210ENST00000558319 EDEM3Q9BZQ6 932 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 TRPC7Q9HCX4 862 aa14.89□□□□□ -0.03
SPG11-210ENST00000558319 CHEK2O96017 543 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 VPS11Q9H270 941 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 RHBDL2Q9NX52 303 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 KRT75O95678 551 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 ZBED1O96006 694 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 PCCAP05165 728 aaPredicted RBP14.88□□□□□ -0.03
SPG11-210ENST00000558319 KPNA2P52292 529 aaKnown RBP14.88□□□□□ -0.03
SPG11-210ENST00000558319 PMS2P54278 862 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 SLC44A5Q8NCS7 719 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 FLCNQ8NFG4 579 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 KLHL11Q9NVR0 708 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 RNF14Q9UBS8 474 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 ITSN2Q9NZM3 1697 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 CTIFO43310 598 aaKnown RBP14.88□□□□□ -0.03
SPG11-210ENST00000558319 ATP5HO75947 161 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 SERPIND1P05546 499 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 ATXN3P54252 364 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms