RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ANKRD36BQ8N2N9 1353 aa8.08□□□□□ -1.12
RTF1-204ENST00000558117 BTBD11A6QL63 1104 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 FAM47E-STBD1D6RA91 191 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 CA12O43570 354 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 ASMTLO95671 621 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 CYP2C8P10632 490 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 GNAT1P11488 350 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 COL6A2P12110 1019 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 IL2RBP14784 551 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 NAT1P18440 290 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 SPIRE1Q08AE8 756 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 EMC4Q5J8M3 183 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 GIMAP6Q6P9H5 292 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 NOP9Q86U38 636 aaKnown RBP8.07□□□□□ -1.12
RTF1-204ENST00000558117 ARHGEF25Q86VW2 580 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 FAM126BQ8IXS8 530 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 PHOSPHO1Q8TCT1 267 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 CAPNS2Q96L46 248 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 MRPL4Q9BYD3 311 aaKnown RBP8.07□□□□□ -1.12
RTF1-204ENST00000558117 NGRNQ9NPE2 291 aaKnown RBP8.07□□□□□ -1.12
RTF1-204ENST00000558117 MYOTQ9UBF9 498 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 NUB1Q9Y5A7 615 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 CACNA1AO00555 2505 aa8.07□□□□□ -1.12
RTF1-204ENST00000558117 TOGARAM1Q9Y4F4 1720 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 PLD2O14939 933 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 TADA3O75528 432 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 RASGRP1O95267 797 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 LCNL1Q6ZST4 164 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 FGD2Q7Z6J4 655 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 MIB1Q86YT6 1006 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 PCDH19Q8TAB3 1148 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 PIP4K2CQ8TBX8 421 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 SMOC1Q9H4F8 434 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 PCDH18Q9HCL0 1135 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 FANCLQ9NW38 375 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 SFMBT1Q9UHJ3 866 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 SLIT3O75094 1523 aa8.06□□□□□ -1.12
RTF1-204ENST00000558117 CPSF1Q10570 1443 aaKnown RBP8.05□□□□□ -1.12
RTF1-204ENST00000558117 ARVCFO00192 962 aa8.05□□□□□ -1.12
RTF1-204ENST00000558117 EFCAB14O75071 495 aa8.05□□□□□ -1.12
RTF1-204ENST00000558117 SRGAP2CP0DJJ0 459 aa8.05□□□□□ -1.12
RTF1-204ENST00000558117 PAK1Q13153 545 aa8.05□□□□□ -1.12
RTF1-204ENST00000558117 CYP4F22Q6NT55 531 aa8.05□□□□□ -1.12
RTF1-204ENST00000558117 CD300LDQ6UXZ3 194 aa8.05□□□□□ -1.12
RTF1-204ENST00000558117 OTOP3Q7RTS5 596 aa8.05□□□□□ -1.12
RTF1-204ENST00000558117 BRAPQ7Z569 592 aa8.05□□□□□ -1.12
RTF1-204ENST00000558117 TRIM39Q9HCM9 518 aa8.05□□□□□ -1.12
RTF1-204ENST00000558117 SLC6A20Q9NP91 592 aa8.05□□□□□ -1.12
RTF1-204ENST00000558117 ITSN1Q15811 1721 aa8.05□□□□□ -1.12
RTF1-204ENST00000558117 NKRFO15226 690 aaKnown RBP eCLIP8.04□□□□□ -1.12
RTF1-204ENST00000558117 C8BP07358 591 aa8.04□□□□□ -1.12
RTF1-204ENST00000558117 MAP2K2P36507 400 aa8.04□□□□□ -1.12
RTF1-204ENST00000558117 ECE1P42892 770 aa8.04□□□□□ -1.12
RTF1-204ENST00000558117 C21orf62-AS1Q17RA5 79 aa8.04□□□□□ -1.12
RTF1-204ENST00000558117 TKFCQ3LXA3 575 aa8.04□□□□□ -1.12
RTF1-204ENST00000558117 SPOCD1Q6ZMY3 1216 aa8.04□□□□□ -1.12
RTF1-204ENST00000558117 HOMER1Q86YM7 354 aa8.04□□□□□ -1.12
RTF1-204ENST00000558117 RBM12BQ8IXT5 1001 aaKnown RBP8.04□□□□□ -1.12
RTF1-204ENST00000558117 DTLQ9NZJ0 730 aa8.04□□□□□ -1.12
RTF1-204ENST00000558117 ABT1Q9ULW3 272 aaKnown RBP8.04□□□□□ -1.12
RTF1-204ENST00000558117 USP47Q96K76 1375 aa8.04□□□□□ -1.12
RTF1-204ENST00000558117 C5P01031 1676 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 ROCK1Q13464 1354 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 TCRBV5S2A0A599 114 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 SMARCA5O60264 1052 aaPredicted RBP8.03□□□□□ -1.12
RTF1-204ENST00000558117 PLA2G1BP04054 148 aaKnown RBP8.03□□□□□ -1.12
RTF1-204ENST00000558117 HMGB2P26583 209 aaKnown RBP8.03□□□□□ -1.12
RTF1-204ENST00000558117 NKX3-2P78367 333 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 CAP1Q01518 475 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 VMACQ2NL98 169 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 TRIM48Q8IWZ4 208 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 ARRDC4Q8NCT1 418 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 FNIP1Q8TF40 1166 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 APPBP2Q92624 585 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 TOE1Q96GM8 510 aaKnown RBP8.03□□□□□ -1.12
RTF1-204ENST00000558117 MAGEB10Q96LZ2 347 aaPredicted RBP8.03□□□□□ -1.12
RTF1-204ENST00000558117 UNC80Q8N2C7 3258 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 NSD3Q9BZ95 1437 aa8.03□□□□□ -1.12
RTF1-204ENST00000558117 RANBP2P49792 3224 aaKnown RBP8.03□□□□□ -1.12
RTF1-204ENST00000558117 TCRBV5S4A2TA0A5A2 114 aa8.02□□□□□ -1.13
RTF1-204ENST00000558117 TLDC2A0PJX2 215 aa8.02□□□□□ -1.13
RTF1-204ENST00000558117 SLC27A2O14975 620 aa8.02□□□□□ -1.13
RTF1-204ENST00000558117 PYGMP11217 842 aa8.02□□□□□ -1.13
RTF1-204ENST00000558117 STAT5AP42229 794 aa8.02□□□□□ -1.13
RTF1-204ENST00000558117 FNDC3BQ53EP0 1204 aaKnown RBP8.02□□□□□ -1.13
RTF1-204ENST00000558117 ZC3H7AQ8IWR0 971 aaKnown RBP8.02□□□□□ -1.13
RTF1-204ENST00000558117 SP8Q8IXZ3 490 aa8.02□□□□□ -1.13
RTF1-204ENST00000558117 LINC01356Q8N9X3 169 aa8.02□□□□□ -1.13
RTF1-204ENST00000558117 ZBTB8AQ96BR9 441 aa8.02□□□□□ -1.13
RTF1-204ENST00000558117 ASH2LQ9UBL3 628 aa8.02□□□□□ -1.13
RTF1-204ENST00000558117 CBLCQ9ULV8 474 aa8.02□□□□□ -1.13
RTF1-204ENST00000558117 SPTBN5Q9NRC6 3674 aaKnown RBP8.02□□□□□ -1.13
RTF1-204ENST00000558117 TCRBV16S1A1N1A0A5B0 115 aa8.01□□□□□ -1.13
RTF1-204ENST00000558117 WNT9AO14904 365 aa8.01□□□□□ -1.13
RTF1-204ENST00000558117 LTFP02788 710 aa8.01□□□□□ -1.13
RTF1-204ENST00000558117 CKMP06732 381 aa8.01□□□□□ -1.13
RTF1-204ENST00000558117 BMP7P18075 431 aa8.01□□□□□ -1.13
RTF1-204ENST00000558117 SDSP20132 328 aa8.01□□□□□ -1.13
RTF1-204ENST00000558117 ST5P78524 1137 aa8.01□□□□□ -1.13
RTF1-204ENST00000558117 GRM1Q13255 1194 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms