RNA–Protein interactions for RNA: ENST00000558088.1

VPS13C-205, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-205ENST00000558088 MFSD5Q6N075 450 aa4.21□□□□□ -1.74
VPS13C-205ENST00000558088 FAM111BQ6SJ93 734 aa4.21□□□□□ -1.74
VPS13C-205ENST00000558088 Q6ZRM9 215 aa4.21□□□□□ -1.74
VPS13C-205ENST00000558088 ANKRD53Q8N9V6 530 aa4.21□□□□□ -1.74
VPS13C-205ENST00000558088 DLG3Q92796 817 aa4.21□□□□□ -1.74
VPS13C-205ENST00000558088 HAS1Q92839 578 aa4.21□□□□□ -1.74
VPS13C-205ENST00000558088 TCF25Q9BQ70 676 aa4.21□□□□□ -1.74
VPS13C-205ENST00000558088 SLC52A2Q9HAB3 445 aa4.21□□□□□ -1.74
VPS13C-205ENST00000558088 SIRPGQ9P1W8 387 aa4.21□□□□□ -1.74
VPS13C-205ENST00000558088 SFMBT1Q9UHJ3 866 aa4.21□□□□□ -1.74
VPS13C-205ENST00000558088 RASSF10A6NK89 507 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 GOLGA6L6A8MZA4 724 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 RPS6KA4O75676 772 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 IPO13O94829 963 aaKnown RBP4.2□□□□□ -1.74
VPS13C-205ENST00000558088 RASGRP1O95267 797 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 BMP5P22003 454 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 GAGE13Q4V321 117 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 TM4SF20Q53R12 229 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 CATSPEREQ5SY80 951 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 FKBP15Q5T1M5 1219 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 OR5AN1Q8NGI8 311 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 SLC25A43Q8WUT9 341 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-205ENST00000558088 ARL8AQ96BM9 186 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 BOCQ9BWV1 1114 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 IL23AQ9NPF7 189 aa4.2□□□□□ -1.74
VPS13C-205ENST00000558088 HECAQ9UBI9 543 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-205ENST00000558088 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-205ENST00000558088 UBE2QL1A1L167 161 aa4.19□□□□□ -1.74
VPS13C-205ENST00000558088 MAFGO15525 162 aa4.19□□□□□ -1.74
VPS13C-205ENST00000558088 DAPK3O43293 454 aa4.19□□□□□ -1.74
VPS13C-205ENST00000558088 MFAP3LO75121 409 aa4.19□□□□□ -1.74
VPS13C-205ENST00000558088 FNTBP49356 437 aa4.19□□□□□ -1.74
VPS13C-205ENST00000558088 SLC6A3Q01959 620 aa4.19□□□□□ -1.74
VPS13C-205ENST00000558088 TOB2Q14106 344 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-205ENST00000558088 SLFN12LQ6IEE8 588 aa4.19□□□□□ -1.74
VPS13C-205ENST00000558088 CC2D1AQ6P1N0 951 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-205ENST00000558088 GSTCDQ8NEC7 633 aa4.19□□□□□ -1.74
VPS13C-205ENST00000558088 PCIF1Q9H4Z3 704 aa4.19□□□□□ -1.74
VPS13C-205ENST00000558088 KCMF1Q9P0J7 381 aa4.19□□□□□ -1.74
VPS13C-205ENST00000558088 SYNPO2Q9UMS6 1093 aa4.19□□□□□ -1.74
VPS13C-205ENST00000558088 CCDC9Q9Y3X0 531 aaKnown RBP4.19□□□□□ -1.74
VPS13C-205ENST00000558088 KRT37O76014 449 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 GCP02774 474 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 ATP2B1P20020 1258 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 SLC25A3Q00325 362 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 ARHGAP44Q17R89 818 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 TMEM177Q53S58 311 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 RABL3Q5HYI8 236 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 LY6G5CQ5SRR4 150 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 FSTL4Q6MZW2 842 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 PCSK4Q6UW60 755 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 OVCH1Q7RTY7 1134 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 DDX53Q86TM3 631 aaKnown RBP4.18□□□□□ -1.74
VPS13C-205ENST00000558088 RPUSD2Q8IZ73 545 aaKnown RBP4.18□□□□□ -1.74
VPS13C-205ENST00000558088 BCL6BQ8N143 479 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-205ENST00000558088 ZNF276Q8N554 614 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 MB21D1Q8N884 522 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 IGSF22Q8N9C0 903 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 ATXN2LQ8WWM7 1075 aaKnown RBP4.18□□□□□ -1.74
VPS13C-205ENST00000558088 RPGRQ92834 1020 aaKnown RBP4.18□□□□□ -1.74
VPS13C-205ENST00000558088 DYDC2Q96IM9 177 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 WDR92Q96MX6 357 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 FAM193BQ96PV7 902 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-205ENST00000558088 GPHA2Q96T91 129 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 GPRC5BQ9NZH0 403 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 NCDNQ9UBB6 729 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 MAGEL2Q9UJ55 1249 aa4.18□□□□□ -1.74
VPS13C-205ENST00000558088 CCDC163A0A0D9SF12 145 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 UBA6A0AVT1 1052 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-205ENST00000558088 C2orf78A6NCI8 922 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 FAM20BO75063 409 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 TOX4O94842 621 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 PRLP01236 227 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 JUNP05412 331 aaKnown RBP4.17□□□□□ -1.74
VPS13C-205ENST00000558088 VSIG10L2P0DP72 767 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 KRT4P19013 534 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 GNAT2P19087 354 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 RGS3P49796 1198 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 KIF11P52732 1056 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 NPEPPSP55786 919 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 ACAP1Q15027 740 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 PTPAQ15257 358 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 TRIM61Q5EBN2 209 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 TTC38Q5R3I4 469 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 LRP10Q7Z4F1 713 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 RTN4RL1Q86UN2 441 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-205ENST00000558088 NME9Q86XW9 330 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 PLA2G15Q8NCC3 412 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 ZSWIM2Q8NEG5 633 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 FOXRED1Q96CU9 486 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-205ENST00000558088 PGBD4Q96DM1 585 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 HIRIP3Q9BW71 556 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-205ENST00000558088 TANGO6Q9C0B7 1094 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 ACSS2Q9NR19 701 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 POLR3BQ9NW08 1133 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-205ENST00000558088 XDHP47989 1333 aa4.17□□□□□ -1.74
VPS13C-205ENST00000558088 TCRBV16S1A1N1A0A5B0 115 aa4.16□□□□□ -1.74
VPS13C-205ENST00000558088 B4E1Z4 1266 aa4.16□□□□□ -1.74
VPS13C-205ENST00000558088 RECQL4O94761 1208 aa4.16□□□□□ -1.74
VPS13C-205ENST00000558088 ABHD16AO95870 558 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms