RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 ARNTL2Q8WYA1 636 aa15.18■□□□□ 0.02
ALPK3-202ENST00000558077 CEP170P1Q96L14 293 aa15.18■□□□□ 0.02
ALPK3-202ENST00000558077 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.18■□□□□ 0.02
ALPK3-202ENST00000558077 SUCLA2Q9P2R7 463 aaPredicted RBP15.18■□□□□ 0.02
ALPK3-202ENST00000558077 PPME1Q9Y570 386 aa15.18■□□□□ 0.02
ALPK3-202ENST00000558077 COL4A4P53420 1690 aaPredicted RBP15.18■□□□□ 0.02
ALPK3-202ENST00000558077 FNDC1Q4ZHG4 1894 aaPredicted RBP15.18■□□□□ 0.02
ALPK3-202ENST00000558077 MYO7AQ13402 2215 aa15.17■□□□□ 0.02
ALPK3-202ENST00000558077 C9IYK1 514 aa15.17■□□□□ 0.02
ALPK3-202ENST00000558077 CSDE1O75534 798 aaKnown RBP15.17■□□□□ 0.02
ALPK3-202ENST00000558077 DGKIO75912 1065 aa15.17■□□□□ 0.02
ALPK3-202ENST00000558077 PTGDRQ13258 359 aa15.17■□□□□ 0.02
ALPK3-202ENST00000558077 FAM43BQ6ZT52 329 aaPredicted RBP15.17■□□□□ 0.02
ALPK3-202ENST00000558077 CATSPER3Q86XQ3 398 aa15.17■□□□□ 0.02
ALPK3-202ENST00000558077 TGS1Q96RS0 853 aaKnown RBP15.17■□□□□ 0.02
ALPK3-202ENST00000558077 ADAM2Q99965 735 aa15.17■□□□□ 0.02
ALPK3-202ENST00000558077 C17orf80Q9BSJ5 609 aa15.17■□□□□ 0.02
ALPK3-202ENST00000558077 RGS18Q9NS28 235 aa15.17■□□□□ 0.02
ALPK3-202ENST00000558077 ANKEF1Q9NU02 776 aa15.17■□□□□ 0.02
ALPK3-202ENST00000558077 NOL7Q9UMY1 257 aaKnown RBP15.17■□□□□ 0.02
ALPK3-202ENST00000558077 KIF3AQ9Y496 699 aa15.17■□□□□ 0.02
ALPK3-202ENST00000558077 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.17■□□□□ 0.02
ALPK3-202ENST00000558077 RALGAPA2Q2PPJ7 1873 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 SPTBN5Q9NRC6 3674 aaKnown RBP15.16■□□□□ 0.02
ALPK3-202ENST00000558077 KIAA1671Q9BY89 1806 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 A0A087WZ62 844 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 GPR182O15218 404 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 FGFR4P22455 802 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 RFC5P40937 340 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 SARSP49591 514 aaKnown RBP15.16■□□□□ 0.02
ALPK3-202ENST00000558077 RARRES1P49788 294 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 FXR2P51116 673 aaKnown RBP eCLIP15.16■□□□□ 0.02
ALPK3-202ENST00000558077 GRB10Q13322 594 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 GNL2Q13823 731 aaKnown RBP15.16■□□□□ 0.02
ALPK3-202ENST00000558077 ECM1Q16610 540 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 XKR9Q5GH70 373 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 LARP1BQ659C4 914 aaKnown RBP15.16■□□□□ 0.02
ALPK3-202ENST00000558077 OTUD6AQ7L8S5 288 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 TMEM143Q96AN5 459 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 GAS2L1Q99501 681 aaPredicted RBP15.16■□□□□ 0.02
ALPK3-202ENST00000558077 FDXACB1Q9BRP7 624 aaPredicted RBP15.16■□□□□ 0.02
ALPK3-202ENST00000558077 POLR3CQ9BUI4 534 aaPredicted RBP15.16■□□□□ 0.02
ALPK3-202ENST00000558077 IFT122Q9HBG6 1241 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 MTCH2Q9Y6C9 303 aa15.16■□□□□ 0.02
ALPK3-202ENST00000558077 XRCC6P12956 609 aaKnown RBP eCLIP15.15■□□□□ 0.02
ALPK3-202ENST00000558077 RPA1P27694 616 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 GATMP50440 423 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 EMC2Q15006 297 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 MCTP1Q6DN14 999 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 RHPN2Q8IUC4 686 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 NPAS4Q8IUM7 802 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 IGSF22Q8N9C0 903 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 PIGOQ8TEQ8 1089 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 PRPF31Q8WWY3 499 aaKnown RBP15.15■□□□□ 0.02
ALPK3-202ENST00000558077 YME1L1Q96TA2 773 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 JPH2Q9BR39 696 aaPredicted RBP15.15■□□□□ 0.02
ALPK3-202ENST00000558077 TUFT1Q9NNX1 390 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 BMP2KQ9NSY1 1161 aaPredicted RBP15.15■□□□□ 0.02
ALPK3-202ENST00000558077 RNF19AQ9NV58 838 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 MTUS1Q9ULD2 1270 aa15.15■□□□□ 0.02
ALPK3-202ENST00000558077 ATG2AQ2TAZ0 1938 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 BRWD1Q9NSI6 2320 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 IGFBP4P22692 258 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 DNM2P50570 870 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 CDC42EP1Q00587 391 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 PDIA5Q14554 519 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 ODR4Q5SWX8 454 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 SLC24A5Q71RS6 500 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 ZNF410Q86VK4 478 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 GDPD5Q8WTR4 605 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 NLRP7Q8WX94 980 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 SLC7A3Q8WY07 619 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 CLP1Q92989 425 aaKnown RBP15.14■□□□□ 0.01
ALPK3-202ENST00000558077 SNX21Q969T3 373 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 MMTAG2Q9BU76 263 aaKnown RBP15.14■□□□□ 0.01
ALPK3-202ENST00000558077 GCOM2Q9BZD3 368 aaPredicted RBP15.14■□□□□ 0.01
ALPK3-202ENST00000558077 MINDY3Q9H8M7 445 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 C1orf112Q9NSG2 853 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 COL4A3BPQ9Y5P4 624 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 ADGRA3Q8IWK6 1321 aa15.14■□□□□ 0.01
ALPK3-202ENST00000558077 H3BQV1 296 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 ARL2P36404 184 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 PRPHP41219 470 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 POLGP54098 1239 aaPredicted RBP15.13■□□□□ 0.01
ALPK3-202ENST00000558077 ATP2C1P98194 919 aaPredicted RBP15.13■□□□□ 0.01
ALPK3-202ENST00000558077 LAMTOR4Q0VGL1 99 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 EPC2Q52LR7 807 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 RILPL1Q5EBL4 403 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 FAM102BQ5T8I3 360 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 POTEGQ6S5H5 508 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 ZNF598Q86UK7 904 aaKnown RBP15.13■□□□□ 0.01
ALPK3-202ENST00000558077 FERMT3Q86UX7 667 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 TMEM192Q8IY95 271 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 EXOC8Q8IYI6 725 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 ASAP3Q8TDY4 903 aa15.13■□□□□ 0.01
ALPK3-202ENST00000558077 INTS4Q96HW7 963 aaKnown RBP15.13■□□□□ 0.01
ALPK3-202ENST00000558077 DBR1Q9UK59 544 aaKnown RBP15.13■□□□□ 0.01
ALPK3-202ENST00000558077 PP2D1A8MPX8 630 aa15.12■□□□□ 0.01
ALPK3-202ENST00000558077 K7ELQ4 463 aaPredicted RBP15.12■□□□□ 0.01
ALPK3-202ENST00000558077 GAS2O43903 313 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms