RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ZNF365Q70YC5 407 aa28.41■■■□□ 2.14
SMAD6-202ENST00000557916 RHPN2Q8IUC4 686 aa28.41■■■□□ 2.14
SMAD6-202ENST00000557916 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.41■■■□□ 2.144e-7■□□□□ 9
SMAD6-202ENST00000557916 FGBP02675 491 aa28.4■■■□□ 2.14
SMAD6-202ENST00000557916 GHRP10912 638 aa28.4■■■□□ 2.14
SMAD6-202ENST00000557916 GPC3P51654 580 aa28.4■■■□□ 2.14
SMAD6-202ENST00000557916 CRYBB1P53674 252 aaPredicted RBP28.4■■■□□ 2.14
SMAD6-202ENST00000557916 LPIN1Q14693 890 aa28.4■■■□□ 2.14
SMAD6-202ENST00000557916 MCPH1Q8NEM0 835 aa28.4■■■□□ 2.14
SMAD6-202ENST00000557916 PRPF31Q8WWY3 499 aaKnown RBP28.4■■■□□ 2.14
SMAD6-202ENST00000557916 PSPC1Q8WXF1 523 aaKnown RBP28.4■■■□□ 2.14
SMAD6-202ENST00000557916 ZNF668Q96K58 619 aaPredicted RBP28.4■■■□□ 2.14
SMAD6-202ENST00000557916 ADAMTS10Q9H324 1103 aa28.4■■■□□ 2.14
SMAD6-202ENST00000557916 COLQQ9Y215 455 aaPredicted RBP28.4■■■□□ 2.14
SMAD6-202ENST00000557916 RBAK-RBAKDNI3L0D1 243 aa28.39■■■□□ 2.14
SMAD6-202ENST00000557916 SSBP05455 408 aaKnown RBP eCLIP28.39■■■□□ 2.14
SMAD6-202ENST00000557916 PLA2G4BP0C869 781 aa28.39■■■□□ 2.14
SMAD6-202ENST00000557916 CYP11B2P19099 503 aa28.39■■■□□ 2.14
SMAD6-202ENST00000557916 SHC4Q6S5L8 630 aa28.39■■■□□ 2.14
SMAD6-202ENST00000557916 MAEAQ7L5Y9 396 aa28.39■■■□□ 2.14
SMAD6-202ENST00000557916 SCLT1Q96NL6 688 aa28.39■■■□□ 2.14
SMAD6-202ENST00000557916 OSMRQ99650 979 aa28.39■■■□□ 2.14
SMAD6-202ENST00000557916 COL4A3BPQ9Y5P4 624 aa28.39■■■□□ 2.14
SMAD6-202ENST00000557916 SQORQ9Y6N5 450 aa28.39■■■□□ 2.14
SMAD6-202ENST00000557916 SHHQ15465 462 aa28.38■■■□□ 2.13
SMAD6-202ENST00000557916 C9orf50Q5SZB4 431 aa28.38■■■□□ 2.13
SMAD6-202ENST00000557916 RRAGBQ5VZM2 374 aa28.38■■■□□ 2.13
SMAD6-202ENST00000557916 KSR1Q8IVT5 923 aa28.38■■■□□ 2.13
SMAD6-202ENST00000557916 SYT2Q8N9I0 419 aaPredicted RBP28.38■■■□□ 2.13
SMAD6-202ENST00000557916 LRRC15Q8TF66 581 aa28.38■■■□□ 2.13
SMAD6-202ENST00000557916 NLRP7Q8WX94 980 aa28.38■■■□□ 2.13
SMAD6-202ENST00000557916 PANK2Q9BZ23 570 aa28.38■■■□□ 2.13
SMAD6-202ENST00000557916 ASAP2O43150 1006 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 ARL2P36404 184 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 PLEKHG4Q58EX7 1191 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 FAM102BQ5T8I3 360 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 TSHZ1Q6ZSZ6 1077 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 OTOP2Q7RTS6 562 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 USP38Q8NB14 1042 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 DBF4BQ8NFT6 615 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 RAD54LQ92698 747 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 GDPD2Q9HCC8 539 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 GPRC5CQ9NQ84 441 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 BLOC1S4Q9NUP1 217 aa28.37■■■□□ 2.13
SMAD6-202ENST00000557916 ACTN1P12814 892 aa28.36■■■□□ 2.13
SMAD6-202ENST00000557916 SLC12A3P55017 1021 aa28.36■■■□□ 2.13
SMAD6-202ENST00000557916 LAMTOR4Q0VGL1 99 aa28.36■■■□□ 2.13
SMAD6-202ENST00000557916 MXD4Q14582 209 aaPredicted RBP28.36■■■□□ 2.13
SMAD6-202ENST00000557916 RINT1Q6NUQ1 792 aa28.36■■■□□ 2.13
SMAD6-202ENST00000557916 CNKSR3Q6P9H4 555 aa28.36■■■□□ 2.13
SMAD6-202ENST00000557916 CCDC73Q6ZRK6 1079 aa28.36■■■□□ 2.13
SMAD6-202ENST00000557916 ZNF410Q86VK4 478 aa28.36■■■□□ 2.13
SMAD6-202ENST00000557916 TMEM40Q8WWA1 233 aa28.36■■■□□ 2.13
SMAD6-202ENST00000557916 SEPT8Q92599 483 aa28.36■■■□□ 2.13
SMAD6-202ENST00000557916 NLRP4Q96MN2 994 aa28.36■■■□□ 2.13
SMAD6-202ENST00000557916 RUSC1Q9BVN2 902 aa28.36■■■□□ 2.13
SMAD6-202ENST00000557916 IFIH1Q9BYX4 1025 aaKnown RBP28.36■■■□□ 2.13
SMAD6-202ENST00000557916 POLR3FQ9H1D9 316 aaPredicted RBP28.36■■■□□ 2.13
SMAD6-202ENST00000557916 AGO3Q9H9G7 860 aaKnown RBP28.36■■■□□ 2.13
SMAD6-202ENST00000557916 C1orf186Q6ZWK4 172 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 TDHQ8IZJ6 230 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 LARP4BQ92615 738 aaKnown RBP28.35■■■□□ 2.13
SMAD6-202ENST00000557916 NOC2LQ9Y3T9 749 aaKnown RBP28.35■■■□□ 2.13
SMAD6-202ENST00000557916 TET1Q8NFU7 2136 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 SIP14410 1827 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 A0A087WZ62 844 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 A0A087X0B3 334 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 RPS6KA5O75582 802 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 SRGAP2CP0DJJ0 459 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 EIF4BP23588 611 aaKnown RBP28.35■■■□□ 2.13
SMAD6-202ENST00000557916 CD52P31358 61 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 DHX8Q14562 1220 aaKnown RBP28.35■■■□□ 2.13
SMAD6-202ENST00000557916 MCM6Q14566 821 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 TCTN1Q2MV58 587 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 RESP18Q5W5W9 173 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 ADALQ6DHV7 355 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 PDILTQ8N807 584 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 ASAP3Q8TDY4 903 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 HERVK_113Q902F9 699 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 FDXACB1Q9BRP7 624 aaPredicted RBP28.35■■■□□ 2.13
SMAD6-202ENST00000557916 GCOM2Q9BZD3 368 aaPredicted RBP28.35■■■□□ 2.13
SMAD6-202ENST00000557916 FAM13BQ9NYF5 915 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 STK17AQ9UEE5 414 aa28.35■■■□□ 2.13
SMAD6-202ENST00000557916 LOXHD1Q8IVV2 1947 aa28.34■■■□□ 2.13
SMAD6-202ENST00000557916 TCHHQ07283 1943 aa28.34■■■□□ 2.13
SMAD6-202ENST00000557916 RANBP2P49792 3224 aaKnown RBP28.34■■■□□ 2.13
SMAD6-202ENST00000557916 PAK2Q13177 524 aa28.34■■■□□ 2.13
SMAD6-202ENST00000557916 APBB2Q92870 758 aa28.34■■■□□ 2.13
SMAD6-202ENST00000557916 RNPC3Q96LT9 517 aaKnown RBP28.34■■■□□ 2.13
SMAD6-202ENST00000557916 POLD4Q9HCU8 107 aa28.34■■■□□ 2.13
SMAD6-202ENST00000557916 PADI3Q9ULW8 664 aa28.34■■■□□ 2.13
SMAD6-202ENST00000557916 DARSP14868 501 aaKnown RBP28.33■■■□□ 2.13
SMAD6-202ENST00000557916 GLRA2P23416 452 aa28.33■■■□□ 2.13
SMAD6-202ENST00000557916 STAT6P42226 847 aa28.33■■■□□ 2.13
SMAD6-202ENST00000557916 IKBKEQ14164 716 aa28.33■■■□□ 2.13
SMAD6-202ENST00000557916 TFDP1Q14186 410 aa28.33■■■□□ 2.13
SMAD6-202ENST00000557916 NAALADL2Q58DX5 795 aa28.33■■■□□ 2.13
SMAD6-202ENST00000557916 RNF149Q8NC42 400 aa28.33■■■□□ 2.13
SMAD6-202ENST00000557916 MTIF3Q9H2K0 278 aaKnown RBP28.33■■■□□ 2.13
SMAD6-202ENST00000557916 KCND2Q9NZV8 630 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms