RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 LONP1P36776 959 aaKnown RBP10.09□□□□□ -0.79
CHD8-214ENST00000557727 NPEPPSP55786 919 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 CHMP4BP1P59074 171 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 GRB10Q13322 594 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 GPNMBQ14956 572 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 PTGISQ16647 500 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 TMEM266Q2M3C6 531 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 TMEM119Q4V9L6 283 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 XKR3Q5GH77 459 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 FAM47CQ5HY64 1035 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 MTHFD1LQ6UB35 978 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 METTL3Q86U44 580 aaKnown RBP10.09□□□□□ -0.79
CHD8-214ENST00000557727 C7orf61Q8IZ16 206 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 LEO1Q8WVC0 666 aaPredicted RBP10.09□□□□□ -0.79
CHD8-214ENST00000557727 FAM167AQ96KS9 214 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 AK8Q96MA6 479 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 ZNF396Q96N95 335 aaPredicted RBP10.09□□□□□ -0.79
CHD8-214ENST00000557727 OSBPL7Q9BZF2 842 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 SLC6A16Q9GZN6 736 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 WNT8AQ9H1J5 351 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 ZSWIM4Q9H7M6 989 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 TCEAL9Q9UHQ7 104 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 CEP131Q9UPN4 1083 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 LAMA3Q16787 3333 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 A0A087X0B3 334 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 RRN3P2A6NIE6 340 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 DCDC2CA8MYV0 355 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 MUTP22033 750 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 YWHABP31946 246 aaKnown RBP10.08□□□□□ -0.8
CHD8-214ENST00000557727 RARRES1P49788 294 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 PTK7Q13308 1070 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 DRP2Q13474 957 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 MBTPS1Q14703 1052 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 PKDCCQ504Y2 493 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 NAALADL2Q58DX5 795 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 ZNF484Q5JVG2 852 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 SPECC1Q5M775 1068 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 ZNF697Q5TEC3 545 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 SHC4Q6S5L8 630 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 TRMT1LQ7Z2T5 733 aaKnown RBP10.08□□□□□ -0.8
CHD8-214ENST00000557727 RPAINQ86UA6 219 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 TPH2Q8IWU9 490 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 KRI1Q8N9T8 703 aaKnown RBP10.08□□□□□ -0.8
CHD8-214ENST00000557727 SNX29Q8TEQ0 813 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 PIGOQ8TEQ8 1089 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 EPSTI1Q96J88 318 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 CCSER1Q9C0I3 900 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 DHX33Q9H6R0 707 aaKnown RBP10.08□□□□□ -0.8
CHD8-214ENST00000557727 XPNPEP1Q9NQW7 623 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 CYP26B1Q9NR63 512 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 BLOC1S4Q9NUP1 217 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 TUBE1Q9UJT0 475 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 PCDHA7Q9UN72 937 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 PCDHA2Q9Y5H9 948 aa10.08□□□□□ -0.8
CHD8-214ENST00000557727 GBF1Q92538 1859 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 XRCC6P12956 609 aaKnown RBP eCLIP10.07□□□□□ -0.8
CHD8-214ENST00000557727 SYN1P17600 705 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 KLRC1P26715 233 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 CYP2C18P33260 490 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 CCT6AP40227 531 aaKnown RBP10.07□□□□□ -0.8
CHD8-214ENST00000557727 IGBP1P78318 339 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 MLLT1Q03111 559 aaPredicted RBP10.07□□□□□ -0.8
CHD8-214ENST00000557727 MGAT3Q09327 533 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 STK38Q15208 465 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 CKAP2LQ8IYA6 745 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 KIAA0319LQ8IZA0 1049 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 SYMPKQ92797 1274 aaKnown RBP10.07□□□□□ -0.8
CHD8-214ENST00000557727 NRBP2Q9NSY0 501 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 ANKEF1Q9NU02 776 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 CHMP5Q9NZZ3 219 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 DBR1Q9UK59 544 aaKnown RBP10.07□□□□□ -0.8
CHD8-214ENST00000557727 KIAA1024Q9UPX6 916 aa10.07□□□□□ -0.8
CHD8-214ENST00000557727 SMIM35A0A1B0GVV1 85 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 DDX11L8A8MPP1 907 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 E9PMD0 336 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 H0YGN5 161 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 TLR3O15455 904 aaKnown RBP10.06□□□□□ -0.8
CHD8-214ENST00000557727 SLC26A4O43511 780 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 GDF9O60383 454 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 CUTAO60888 179 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 MAFO75444 373 aaPredicted RBP10.06□□□□□ -0.8
CHD8-214ENST00000557727 TIMP1P01033 207 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 CHRNA1P02708 482 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 CKBP12277 381 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 CLCN3P51790 818 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 KRT85P78386 507 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 KARSQ15046 597 aaKnown RBP10.06□□□□□ -0.8
CHD8-214ENST00000557727 MTERF2Q49AM1 385 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 FAM26DQ5JW98 314 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 ZNF618Q5T7W0 954 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 KRT79Q5XKE5 535 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 HAUS3Q68CZ6 603 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 SMYD5Q6GMV2 418 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 CABP7Q86V35 215 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 ERMNQ8TAM6 284 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 KCNG4Q8TDN1 519 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 DNAJB3Q8WWF6 145 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 DPF3Q92784 378 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 TNPO1Q92973 898 aaKnown RBP10.06□□□□□ -0.8
CHD8-214ENST00000557727 RAB34Q9BZG1 259 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms