RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 H0YCG3 227 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 USO1O60763 962 aaKnown RBP15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 PTMSP20962 102 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 ARL2P36404 184 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 THPOP40225 353 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 MFSD5Q6N075 450 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 LRRC8DQ7L1W4 858 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 C7orf61Q8IZ16 206 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 TMEM199Q8N511 208 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 PDILTQ8N807 584 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 DNAJB3Q8WWF6 145 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 DHX38Q92620 1227 aaKnown RBP15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 KCNN1Q92952 543 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 SUCLA2Q9P2R7 463 aaPredicted RBP15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 HOOK1Q9UJC3 728 aaKnown RBP15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 AKT3Q9Y243 479 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 COL4A3BPQ9Y5P4 624 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 TRPV2Q9Y5S1 764 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 TET1Q8NFU7 2136 aa15.65■□□□□ 0.1
SUPT16H-208ENST00000557652 A0A1B0GVL5 298 aa15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 RSPH10B2B2RC85 870 aa15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 SSBP05455 408 aaKnown RBP eCLIP15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 RSPH10BP0C881 870 aa15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 CLCN3P51790 818 aa15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 CRYBB1P53674 252 aaPredicted RBP15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 MLLT1Q03111 559 aaPredicted RBP15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 SCN5AQ14524 2016 aa15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 RUFY4Q6ZNE9 571 aa15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 GPBP1Q86WP2 473 aa15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 IFNLR1Q8IU57 520 aaPredicted RBP15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 RPUSD2Q8IZ73 545 aaKnown RBP15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 DHX58Q96C10 678 aa15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 IFT74Q96LB3 600 aa15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 PLIN2Q99541 437 aa15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 CELF4Q9BZC1 486 aaKnown RBP15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 FAM49AQ9H0Q0 323 aaPredicted RBP15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 PRDM5Q9NQX1 630 aaPredicted RBP15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 LARSQ9P2J5 1176 aaKnown RBP15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 SEL1LQ9UBV2 794 aa15.64■□□□□ 0.09
SUPT16H-208ENST00000557652 A0A087X0B3 334 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 ZNF202O95125 648 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 KRT18P05783 430 aaKnown RBP15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 IQCF3P0C7M6 154 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 GAP43P17677 238 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 NAMPTP43490 491 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 GPC3P51654 580 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 NDUFA8P51970 172 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 MGAT3Q09327 533 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 PPIGQ13427 754 aaKnown RBP eCLIP15.63■□□□□ 0.093e-6■□□□□ 10.4
SUPT16H-208ENST00000557652 MKRN4PQ13434 485 aaPredicted RBP15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 MCM6Q14566 821 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 SRGAP1Q7Z6B7 1085 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 LRRC71Q8N4P6 559 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 SPIRE2Q8WWL2 714 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 APBB2Q92870 758 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 LBHD1Q9BQE6 289 aaPredicted RBP15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 GCOM2Q9BZD3 368 aaPredicted RBP15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 C2orf40Q9H1Z8 148 aa15.63■□□□□ 0.09
SUPT16H-208ENST00000557652 MICAL3Q7RTP6 2002 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 TRIM43BA6NCK2 446 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 ACTN4O43707 911 aaKnown RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 TBCAO75347 108 aaKnown RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 GPR32O75388 356 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 MAPTP10636 758 aaKnown RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 PHKA2P46019 1235 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 ZNF131P52739 623 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 EFNA5P52803 228 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 SMTNP53814 917 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 NLRP11P59045 1033 aaKnown RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 LAMTOR4Q0VGL1 99 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 DMP1Q13316 513 aaPredicted RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 ZNF618Q5T7W0 954 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 FAM102BQ5T8I3 360 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 FMR1NBQ8N0W7 255 aaPredicted RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 ENGASEQ8NFI3 743 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 PPP1R13LQ8WUF5 828 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 PRPF31Q8WWY3 499 aaKnown RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 TRIM43Q96BQ3 446 aaPredicted RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 C7orf25Q9BPX7 421 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 SH2D3AQ9BRG2 576 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 NTPCRQ9BSD7 190 aaKnown RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 RUSC1Q9BVN2 902 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 PANK2Q9BZ23 570 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 GTPBP4Q9BZE4 634 aaKnown RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 POLR3FQ9H1D9 316 aaPredicted RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 ADAMTS10Q9H324 1103 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 PARVGQ9HBI0 331 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 CDY2AQ9Y6F7 541 aa15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 MKI67P46013 3256 aaKnown RBP15.62■□□□□ 0.09
SUPT16H-208ENST00000557652 PVALEFA0A1B0GWK0 134 aa15.61■□□□□ 0.09
SUPT16H-208ENST00000557652 KINO60870 393 aaKnown RBP15.61■□□□□ 0.09
SUPT16H-208ENST00000557652 EFCAB14O75071 495 aa15.61■□□□□ 0.09
SUPT16H-208ENST00000557652 HIP1RO75146 1068 aa15.61■□□□□ 0.09
SUPT16H-208ENST00000557652 PRPF40AO75400 957 aaKnown RBP15.61■□□□□ 0.09
SUPT16H-208ENST00000557652 CHRNA1P02708 482 aa15.61■□□□□ 0.09
SUPT16H-208ENST00000557652 CXCL10P02778 98 aa15.61■□□□□ 0.09
SUPT16H-208ENST00000557652 PLS3P13797 630 aa15.61■□□□□ 0.09
SUPT16H-208ENST00000557652 EIF4BP23588 611 aaKnown RBP15.61■□□□□ 0.09
SUPT16H-208ENST00000557652 ARSHQ5FYA8 562 aa15.61■□□□□ 0.09
SUPT16H-208ENST00000557652 TRAF7Q6Q0C0 670 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms