RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 HSP90AB4PQ58FF6 505 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 MBLAC2Q68D91 279 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 CPNE8Q86YQ8 564 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 SPICE1Q8N0Z3 855 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 GIMAP7Q8NHV1 300 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 MFSD14AQ96MC6 490 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 AIFM3Q96NN9 605 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 MMP19Q99542 508 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 THSD7BQ9C0I4 1608 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 UBA5Q9GZZ9 404 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 TOPORSQ9NS56 1045 aaPredicted RBP6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 BSDC1Q9NW68 430 aaPredicted RBP6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 NOC2LQ9Y3T9 749 aaKnown RBP6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 CHD6Q8TD26 2715 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 CEP152O94986 1710 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 TRBV23OR9-2A0A075B6M9 112 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 SLC12A8A0AV02 714 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 F13BP05160 661 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 PDE6AP16499 860 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 TPP2P29144 1249 aaPredicted RBP6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 GP2P55259 537 aaKnown RBP6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 LAPTM5Q13571 262 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 SAFBQ15424 915 aaKnown RBP eCLIP6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 ZNF174Q15697 407 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 RTP2Q5QGT7 225 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 IFIT1BQ5T764 474 aaKnown RBP6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 INTS5Q6P9B9 1019 aaKnown RBP6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 OTOP1Q7RTM1 612 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 OSTM1Q86WC4 334 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 RASSF3Q86WH2 238 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 KRTAP1-3Q8IUG1 177 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 NUP88Q99567 741 aaPredicted RBP6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 BOCQ9BWV1 1114 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 MS4A5Q9H3V2 200 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 PPCSQ9HAB8 311 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 MAN1C1Q9NR34 630 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 TOMM22Q9NS69 142 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 ATG3Q9NT62 314 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 FBXL7Q9UJT9 491 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 FLNBO75369 2602 aaKnown RBP6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 QSER1Q2KHR3 1735 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 CDC42BPAQ5VT25 1732 aa6.11□□□□□ -1.43
MTHFD1-216ENST00000557539 USP6P35125 1406 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 ARHGEF10O15013 1369 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 KMT2BQ9UMN6 2715 aaPredicted RBP6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 SSU72P8A0A1W2PR75 194 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 ANO9A1A5B4 782 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 TRIM75PA6NK02 468 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 KCNK3O14649 394 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 ZNF205O95201 554 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 LSP1P33241 339 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 BCL6P41182 706 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 GPR3P46089 330 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 JAM2P57087 298 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 LACTBP83111 547 aaPredicted RBP6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 LSAMPQ13449 338 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 GRAMD1BQ3KR37 738 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 PAOXQ6QHF9 649 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 FAM214BQ7L5A3 538 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 MORC1Q86VD1 984 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 COL23A1Q86Y22 540 aaPredicted RBP6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 MFSD4AQ8N468 514 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 KIAA1958Q8N8K9 716 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 PIWIL2Q8TC59 973 aaKnown RBP6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 TTC17Q96AE7 1141 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 STRBPQ96SI9 672 aaKnown RBP6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 ELF4Q99607 663 aaPredicted RBP6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 CDADC1Q9BWV3 514 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 JAM3Q9BX67 310 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 GPR62Q9BZJ7 368 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 SLC12A5Q9H2X9 1139 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 PTPRHQ9HD43 1115 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 AP5S1Q9NUS5 200 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 MTMR10Q9NXD2 777 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 CLDND1Q9NY35 253 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 GTF2IRD1Q9UHL9 959 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 SPO11Q9Y5K1 396 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 TIMM13Q9Y5L4 95 aaPredicted RBP6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 CAPN6Q9Y6Q1 641 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 ZDBF2Q9HCK1 2354 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 ARHGEF5Q12774 1597 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 PRUNE2Q8WUY3 3088 aa6.1□□□□□ -1.43
MTHFD1-216ENST00000557539 A0A0G2JLW4 131 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 LCHNA4D1U4 455 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 AP1G1O43747 822 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 FKTNO75072 461 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 PHKG2P15735 406 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 PCBP3P57721 371 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 RPL11P62913 178 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 SMAD3P84022 425 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 IRF9Q00978 393 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 GALEQ14376 348 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 SMAD2Q15796 467 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 CHRNA2Q15822 529 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 RRP12Q5JTH9 1297 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 GPR158Q5T848 1215 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 USHBP1Q8N6Y0 703 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 MARCH10Q8NA82 808 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms