RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 NPEPPSP55786 919 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 NCBP1Q09161 790 aaKnown RBP15.4■□□□□ 0.06
VPS33B-206ENST00000557358 PTGDRQ13258 359 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 CUL4AQ13619 759 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 TFDP1Q14186 410 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 MXD4Q14582 209 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-206ENST00000557358 EMC2Q15006 297 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 DTHD1Q6ZMT9 781 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 SLC24A5Q71RS6 500 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 BRAPQ7Z569 592 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 INTS4Q96HW7 963 aaKnown RBP15.4■□□□□ 0.06
VPS33B-206ENST00000557358 NLRP4Q96MN2 994 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 ADAM2Q99965 735 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 SH2D3AQ9BRG2 576 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 POLR3CQ9BUI4 534 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-206ENST00000557358 OSBPL7Q9BZF2 842 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 DHX33Q9H6R0 707 aaKnown RBP15.4■□□□□ 0.06
VPS33B-206ENST00000557358 CERS4Q9HA82 394 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 ATP6V0A4Q9HBG4 840 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 LRWD1Q9UFC0 647 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 COL4A3BPQ9Y5P4 624 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 PTPRSQ13332 1948 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 LINC01553A4QN01 128 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 VPS37CA5D8V6 355 aaPredicted RBP15.39■□□□□ 0.05
VPS33B-206ENST00000557358 K7ELQ4 463 aaPredicted RBP15.39■□□□□ 0.05
VPS33B-206ENST00000557358 HOXA2O43364 376 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 RPA1P27694 616 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 PRPHP41219 470 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 SARSP49591 514 aaKnown RBP15.39■□□□□ 0.05
VPS33B-206ENST00000557358 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.05
VPS33B-206ENST00000557358 ERVK-21P61565 698 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 BTG3Q14201 252 aaPredicted RBP15.39■□□□□ 0.05
VPS33B-206ENST00000557358 PDIA5Q14554 519 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 KRT79Q5XKE5 535 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 FAM228AQ86W67 206 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 SLC17A8Q8NDX2 589 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 FBXO22Q8NEZ5 403 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 ADAMTS10Q9H324 1103 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 CDHR5Q9HBB8 845 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 RGS18Q9NS28 235 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 MTUS1Q9ULD2 1270 aa15.39■□□□□ 0.05
VPS33B-206ENST00000557358 LCHNA4D1U4 455 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 ARHGEF35A5YM69 484 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 WNT7AO00755 349 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 SKIP12755 728 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 CCT6AP40227 531 aaKnown RBP15.38■□□□□ 0.05
VPS33B-206ENST00000557358 PTPROQ16827 1216 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 CATSPER4Q7RTX7 472 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 ABI1Q8IZP0 508 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 MICALL1Q8N3F8 863 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 MCPH1Q8NEM0 835 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 SP7Q8TDD2 431 aaPredicted RBP15.38■□□□□ 0.05
VPS33B-206ENST00000557358 TMEM40Q8WWA1 233 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 TMEM143Q96AN5 459 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 CHST12Q9NRB3 414 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 PCDHB6Q9Y5E3 794 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 ADGRA3Q8IWK6 1321 aa15.38■□□□□ 0.05
VPS33B-206ENST00000557358 A0A087WZ62 844 aa15.37■□□□□ 0.05
VPS33B-206ENST00000557358 DGKIO75912 1065 aa15.37■□□□□ 0.05
VPS33B-206ENST00000557358 SRGAP2CP0DJJ0 459 aa15.37■□□□□ 0.05
VPS33B-206ENST00000557358 PHKA2P46019 1235 aa15.37■□□□□ 0.05
VPS33B-206ENST00000557358 PCBP1Q15365 356 aaKnown RBP eCLIP15.37■□□□□ 0.05
VPS33B-206ENST00000557358 SPOUT1Q5T280 376 aaKnown RBP15.37■□□□□ 0.05
VPS33B-206ENST00000557358 SRGAP1Q7Z6B7 1085 aa15.37■□□□□ 0.05
VPS33B-206ENST00000557358 CATSPER3Q86XQ3 398 aa15.37■□□□□ 0.05
VPS33B-206ENST00000557358 CMTR2Q8IYT2 770 aaKnown RBP15.37■□□□□ 0.05
VPS33B-206ENST00000557358 PRPF31Q8WWY3 499 aaKnown RBP15.37■□□□□ 0.05
VPS33B-206ENST00000557358 PPM1EQ8WY54 764 aa15.37■□□□□ 0.05
VPS33B-206ENST00000557358 ZNF668Q96K58 619 aaPredicted RBP15.37■□□□□ 0.05
VPS33B-206ENST00000557358 CEP89Q96ST8 783 aa15.37■□□□□ 0.05
VPS33B-206ENST00000557358 FDXACB1Q9BRP7 624 aaPredicted RBP15.37■□□□□ 0.05
VPS33B-206ENST00000557358 TMX1Q9H3N1 280 aa15.37■□□□□ 0.05
VPS33B-206ENST00000557358 ELAC1Q9H777 363 aaKnown RBP15.37■□□□□ 0.05
VPS33B-206ENST00000557358 AAASQ9NRG9 546 aa15.37■□□□□ 0.05
VPS33B-206ENST00000557358 BMP2KQ9NSY1 1161 aaPredicted RBP15.37■□□□□ 0.05
VPS33B-206ENST00000557358 LMCD1Q9NZU5 365 aa15.37■□□□□ 0.05
VPS33B-206ENST00000557358 WRAP73Q9P2S5 460 aaPredicted RBP15.37■□□□□ 0.05
VPS33B-206ENST00000557358 DBR1Q9UK59 544 aaKnown RBP15.37■□□□□ 0.05
VPS33B-206ENST00000557358 RBM19Q9Y4C8 960 aaKnown RBP15.37■□□□□ 0.05
VPS33B-206ENST00000557358 ERLIN2O94905 339 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 RB1P06400 928 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 PDIA4P13667 645 aaKnown RBP15.36■□□□□ 0.05
VPS33B-206ENST00000557358 CTNNB1P35222 781 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 RARRES1P49788 294 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 LAMTOR4Q0VGL1 99 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 DRP2Q13474 957 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 NBR1Q14596 966 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 SKIV2LQ15477 1246 aaKnown RBP15.36■□□□□ 0.05
VPS33B-206ENST00000557358 ARL6IP4Q66PJ3 421 aaKnown RBP15.36■□□□□ 0.05
VPS33B-206ENST00000557358 TWF2Q6IBS0 349 aaKnown RBP15.36■□□□□ 0.05
VPS33B-206ENST00000557358 FERMT3Q86UX7 667 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 TMEM192Q8IY95 271 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 SNX29Q8TEQ0 813 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 PIGOQ8TEQ8 1089 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 RSPH1Q8WYR4 309 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 SNX21Q969T3 373 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 CDK5RAP3Q96JB5 506 aa15.36■□□□□ 0.05
VPS33B-206ENST00000557358 C11orf84Q9BUA3 381 aaPredicted RBP15.36■□□□□ 0.05
VPS33B-206ENST00000557358 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.36■□□□□ 0.05
VPS33B-206ENST00000557358 TMEM161AQ9NX61 479 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms