RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SAFB2Q14151 953 aaKnown RBP eCLIP6.32□□□□□ -1.4
VRK1-207ENST00000557352 ACAP1Q15027 740 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 IGFL4Q6B9Z1 124 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 SLFN12LQ6IEE8 588 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 SGMS1Q86VZ5 419 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 D2HGDHQ8N465 521 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 KIAA1958Q8N8K9 716 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 OR5AN1Q8NGI8 311 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 C16orf92Q96LL3 132 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 CSRNP2Q9H175 543 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 B4GALT6Q9UBX8 382 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 ING1Q9UK53 422 aaPredicted RBP6.32□□□□□ -1.4
VRK1-207ENST00000557352 DENND2AQ9ULE3 1009 aa6.32□□□□□ -1.4
VRK1-207ENST00000557352 C2orf78A6NCI8 922 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 CBX4O00257 560 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 C1SP09871 688 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 JMJD7P0C870 316 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 RANGAP1P46060 587 aaPredicted RBP6.31□□□□□ -1.4
VRK1-207ENST00000557352 HHEXQ03014 270 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 PTH1RQ03431 593 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 ZNF174Q15697 407 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 DGKDQ16760 1214 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 TTC38Q5R3I4 469 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 CDCA2Q69YH5 1023 aaPredicted RBP6.31□□□□□ -1.4
VRK1-207ENST00000557352 UBE2R2Q712K3 238 aaPredicted RBP6.31□□□□□ -1.4
VRK1-207ENST00000557352 NKD2Q969F2 451 aaPredicted RBP6.31□□□□□ -1.4
VRK1-207ENST00000557352 GFM2Q969S9 779 aaKnown RBP6.31□□□□□ -1.4
VRK1-207ENST00000557352 SLC7A6OSQ96CW6 309 aaPredicted RBP6.31□□□□□ -1.4
VRK1-207ENST00000557352 MENTQ9BUN1 341 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 SLC6A15Q9H2J7 730 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 TMEM260Q9NX78 707 aa6.31□□□□□ -1.4
VRK1-207ENST00000557352 HECAQ9UBI9 543 aaPredicted RBP6.31□□□□□ -1.4
VRK1-207ENST00000557352 RFPL3O75679 317 aa6.3□□□□□ -1.4
VRK1-207ENST00000557352 ASMTLO95671 621 aa6.3□□□□□ -1.4
VRK1-207ENST00000557352 FLT3P36888 993 aa6.3□□□□□ -1.4
VRK1-207ENST00000557352 EPHA7Q15375 998 aa6.3□□□□□ -1.4
VRK1-207ENST00000557352 SPTY2D1Q68D10 685 aaPredicted RBP6.3□□□□□ -1.4
VRK1-207ENST00000557352 TUBGCP5Q96RT8 1024 aa6.3□□□□□ -1.4
VRK1-207ENST00000557352 KCMF1Q9P0J7 381 aa6.3□□□□□ -1.4
VRK1-207ENST00000557352 RBM8AQ9Y5S9 174 aaKnown RBP6.3□□□□□ -1.4
VRK1-207ENST00000557352 A0A1W2PRX2 142 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 CAPN14A8MX76 684 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 NARSO43776 548 aaKnown RBP6.29□□□□□ -1.4
VRK1-207ENST00000557352 ZNF202O95125 648 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 SLC9A1P19634 815 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 PABPC4Q13310 644 aaKnown RBP eCLIP6.29□□□□□ -1.4
VRK1-207ENST00000557352 LSM12Q3MHD2 195 aaKnown RBP6.29□□□□□ -1.4
VRK1-207ENST00000557352 CCDC144BQ3MJ40 725 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 CFAP100Q494V2 611 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 PRAMEF9Q5VWM5 478 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 CREB3L3Q68CJ9 461 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 NME9Q86XW9 330 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 CACTINQ8WUQ7 758 aaKnown RBP6.29□□□□□ -1.4
VRK1-207ENST00000557352 GCDHQ92947 438 aaPredicted RBP6.29□□□□□ -1.4
VRK1-207ENST00000557352 RPL10LQ96L21 214 aaKnown RBP6.29□□□□□ -1.4
VRK1-207ENST00000557352 PLEKHG4BQ96PX9 1271 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 GPHA2Q96T91 129 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 MPHOSPH9Q99550 1183 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 ELF4Q99607 663 aaPredicted RBP6.29□□□□□ -1.4
VRK1-207ENST00000557352 SLITRK6Q9H5Y7 841 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 GIT1Q9Y2X7 761 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 SH3BP1Q9Y3L3 701 aa6.29□□□□□ -1.4
VRK1-207ENST00000557352 OVOL3O00110 214 aa6.28□□□□□ -1.4
VRK1-207ENST00000557352 BPIFB4P59827 614 aa6.28□□□□□ -1.4
VRK1-207ENST00000557352 ADAM8P78325 824 aa6.28□□□□□ -1.4
VRK1-207ENST00000557352 MYBPC3Q14896 1274 aa6.28□□□□□ -1.4
VRK1-207ENST00000557352 ESRP1Q6NXG1 681 aaKnown RBP6.28□□□□□ -1.4
VRK1-207ENST00000557352 BMP8AQ7Z5Y6 402 aa6.28□□□□□ -1.4
VRK1-207ENST00000557352 THEMISQ8N1K5 641 aaPredicted RBP6.28□□□□□ -1.4
VRK1-207ENST00000557352 ANKRD53Q8N9V6 530 aa6.28□□□□□ -1.4
VRK1-207ENST00000557352 DYDC2Q96IM9 177 aa6.28□□□□□ -1.4
VRK1-207ENST00000557352 HAPLN2Q9GZV7 340 aa6.28□□□□□ -1.4
VRK1-207ENST00000557352 ZNF703Q9H7S9 590 aaPredicted RBP6.28□□□□□ -1.4
VRK1-207ENST00000557352 AURKAIP1Q9NWT8 199 aaPredicted RBP6.28□□□□□ -1.4
VRK1-207ENST00000557352 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
VRK1-207ENST00000557352 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
VRK1-207ENST00000557352 BCAR1P56945 870 aa6.27□□□□□ -1.41
VRK1-207ENST00000557352 ABHD18Q0P651 414 aa6.27□□□□□ -1.41
VRK1-207ENST00000557352 TCIRG1Q13488 830 aa6.27□□□□□ -1.41
VRK1-207ENST00000557352 GAREM2Q75VX8 874 aa6.27□□□□□ -1.41
VRK1-207ENST00000557352 RPGRQ92834 1020 aaKnown RBP6.27□□□□□ -1.41
VRK1-207ENST00000557352 DRC1Q96MC2 740 aa6.27□□□□□ -1.41
VRK1-207ENST00000557352 WDR92Q96MX6 357 aa6.27□□□□□ -1.41
VRK1-207ENST00000557352 INTS7Q9NVH2 962 aaKnown RBP6.27□□□□□ -1.41
VRK1-207ENST00000557352 SPO11Q9Y5K1 396 aa6.27□□□□□ -1.41
VRK1-207ENST00000557352 CYP27B1O15528 508 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 ADCY1Q08828 1119 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 FHL2Q14192 279 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 KANSL1Q7Z3B3 1105 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 CLEC14AQ86T13 490 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 TMPRSS6Q8IU80 811 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 SYNPOQ8N3V7 929 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 UBXN4Q92575 508 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 ORAI3Q9BRQ5 295 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 PIF1Q9H611 641 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 POLR3BQ9NW08 1133 aaPredicted RBP6.26□□□□□ -1.41
VRK1-207ENST00000557352 OXSMQ9NWU1 459 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 CEP72Q9P209 647 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 DNAI1Q9UI46 699 aa6.26□□□□□ -1.41
VRK1-207ENST00000557352 UBE2QL1A1L167 161 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms