RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 SF3A1Q15459 793 aaKnown RBP18.64■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ARL6IP4Q66PJ3 421 aaKnown RBP18.64■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 TCP11Q8WWU5 503 aa18.64■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 PSPC1Q8WXF1 523 aaKnown RBP18.64■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 TMEM143Q96AN5 459 aa18.64■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ADAMTS10Q9H324 1103 aa18.64■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 COL4A3BPQ9Y5P4 624 aa18.64■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 LOXHD1Q8IVV2 1947 aa18.64■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 A0A087WWV3 80 aa18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 DGAT1O75907 488 aa18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 UPP2O95045 317 aa18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 MUTP22033 750 aa18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 IL17AQ16552 155 aa18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ZNF410Q86VK4 478 aa18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 FAM228AQ86W67 206 aa18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 GCOM2Q9BZD3 368 aaPredicted RBP18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 TTYH1Q9H313 450 aaPredicted RBP18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ZSCAN16Q9H4T2 348 aaPredicted RBP18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ZNF576Q9H609 170 aa18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ERVK-5Q9HDB9 667 aa18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 DBR1Q9UK59 544 aaKnown RBP18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ST3GAL5Q9UNP4 418 aa18.63■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 A0A087WZ62 844 aa18.62■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 DENND3A2RUS2 1198 aa18.62■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ARHGEF35A5YM69 484 aa18.62■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 XRCC6P12956 609 aaKnown RBP eCLIP18.62■□□□□ 0.574e-8■■■■■ 31.9
TVP23C-CDRT4-204ENST00000557349 DARSP14868 501 aaKnown RBP18.62■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 EIF4BP23588 611 aaKnown RBP18.62■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ZRSR1Q15695 479 aaKnown RBP18.62■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 FAM173BQ6P4H8 233 aa18.62■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 LINC01599Q8WXQ3 324 aa18.62■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 FDXACB1Q9BRP7 624 aaPredicted RBP18.62■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 DDX19AQ9NUU7 478 aaKnown RBP18.62■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 KIAA1024Q9UPX6 916 aa18.62■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 PDIA4P13667 645 aaKnown RBP18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 IBSPP21815 317 aaPredicted RBP18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 SFPQP23246 707 aaKnown RBP eCLIP18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 CDC25AP30304 524 aa18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 FOXD4L5Q5VV16 416 aaPredicted RBP18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 KSR1Q8IVT5 923 aa18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 PRPF31Q8WWY3 499 aaKnown RBP18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 FOXD4L4Q8WXT5 416 aaPredicted RBP18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 TOP1MTQ969P6 601 aa18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 CDK5RAP3Q96JB5 506 aa18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 YME1L1Q96TA2 773 aa18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 RAD9AQ99638 391 aa18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 TSPYL2Q9H2G4 693 aaPredicted RBP18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 TMX1Q9H3N1 280 aa18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 SEMA6BQ9H3T3 888 aa18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 XPNPEP1Q9NQW7 623 aa18.61■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ENPP3O14638 875 aa18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 CEBPZQ03701 1054 aaKnown RBP18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 LAMTOR4Q0VGL1 99 aa18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 BECN1Q14457 450 aa18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ECM1Q16610 540 aa18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 FAM43BQ6ZT52 329 aaPredicted RBP18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 MAEAQ7L5Y9 396 aa18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 MCPH1Q8NEM0 835 aa18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ADAM2Q99965 735 aa18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 INO80BQ9C086 356 aaPredicted RBP18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 MTMR10Q9NXD2 777 aa18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 INSL6Q9Y581 213 aa18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 CLIC4Q9Y696 253 aa18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 SZT2Q5T011 3432 aa18.6■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 LCHNA4D1U4 455 aa18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 CSDE1O75534 798 aaKnown RBP18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 SRGAP2CP0DJJ0 459 aa18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 FGFR4P22455 802 aa18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 TFDP1Q14186 410 aa18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 MXD4Q14582 209 aaPredicted RBP18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 PADI6Q6TGC4 694 aa18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 RNF149Q8NC42 400 aa18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 AK8Q96MA6 479 aa18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 POLR3FQ9H1D9 316 aaPredicted RBP18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 BHMT2Q9H2M3 363 aa18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 C1orf112Q9NSG2 853 aa18.59■□□□□ 0.57
TVP23C-CDRT4-204ENST00000557349 ASAP2O43150 1006 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 MGEA5O60502 916 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 SLC34A2O95436 690 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 STAG3L1P0CL83 205 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 ZSCAN22P10073 491 aaPredicted RBP18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 ZSCAN20P17040 1043 aaPredicted RBP18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 PHKA2P46019 1235 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 CATSPER4Q7RTX7 472 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 RTN4RL1Q86UN2 441 aaPredicted RBP18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 NPAS4Q8IUM7 802 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 RASSF8Q8NHQ8 419 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 GUCD1Q96NT3 240 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 MMTAG2Q9BU76 263 aaKnown RBP18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 NT5C3AQ9H0P0 336 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 LRFN2Q9ULH4 789 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 DNM3Q9UQ16 869 aa18.58■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 E9PMD0 336 aa18.57■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 MARCKSP29966 332 aaPredicted RBP18.57■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 LONP1P36776 959 aaKnown RBP18.57■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 UBA7P41226 1012 aa18.57■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 SARSP49591 514 aaKnown RBP18.57■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 HTRA4P83105 476 aaPredicted RBP18.57■□□□□ 0.56
TVP23C-CDRT4-204ENST00000557349 TAP1Q03518 808 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms