RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 PPP1R16BQ96T49 567 aa12.13□□□□□ -0.47
HNRNPC-230ENST00000557201 PHF7Q9BWX1 381 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-230ENST00000557201 TMEM117Q9H0C3 514 aa12.13□□□□□ -0.47
HNRNPC-230ENST00000557201 S1PR5Q9H228 398 aa12.13□□□□□ -0.47
HNRNPC-230ENST00000557201 ATP6V0A4Q9HBG4 840 aa12.13□□□□□ -0.47
HNRNPC-230ENST00000557201 AAASQ9NRG9 546 aa12.13□□□□□ -0.47
HNRNPC-230ENST00000557201 PCDHA10Q9Y5I2 948 aa12.13□□□□□ -0.47
HNRNPC-230ENST00000557201 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 MAGEB2O15479 319 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 PSAPP07602 524 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 LAG3P18627 525 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 IBSPP21815 317 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 CLCN3P51790 818 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 ZXDAP98168 799 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 FGD1P98174 961 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 APOBRQ0VD83 1088 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 Q6ZUG5 572 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 METTL13Q8N6R0 699 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 MRPS27Q92552 414 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 C6orf50Q9HD87 102 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 GABBR1Q9UBS5 961 aa12.12□□□□□ -0.47
HNRNPC-230ENST00000557201 FSD2A1L4K1 749 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 TMEM221A6NGB7 291 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 M0R296 226 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 EIF4BP23588 611 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 NEK4P51957 841 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 NLRP11P59045 1033 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 PRR16Q569H4 304 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 CLLU1OSQ5K130 101 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 SPOUT1Q5T280 376 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 EFCAB12Q6NXP0 572 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 SYCE2Q6PIF2 218 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 ECHDC2Q86YB7 292 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 CKAP2LQ8IYA6 745 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 ZNF710Q8N1W2 664 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 MICAL1Q8TDZ2 1067 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 CCDC12Q8WUD4 166 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 FAM167AQ96KS9 214 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 PDRG1Q9NUG6 133 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 CEP131Q9UPN4 1083 aa12.11□□□□□ -0.47
HNRNPC-230ENST00000557201 HIDE1A8MVS5 230 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 WDR64B1ANS9 1081 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 MSH4O15457 936 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 GNA11P29992 359 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 GPC3P51654 580 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 TOB2Q14106 344 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 RABEP1Q15276 862 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 ANKRD1Q15327 319 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 TARBP2Q15633 366 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 UGCGQ16739 394 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 IER5LQ5T953 404 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 ANKRD54Q6NXT1 300 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 KCNT2Q6UVM3 1135 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 B3GNT9Q6UX72 402 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 TRMT1LQ7Z2T5 733 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 ZNF598Q86UK7 904 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 LRRC71Q8N4P6 559 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 PRSS33Q8NF86 280 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 SLC5A5Q92911 643 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 BRF1Q92994 677 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 PHKBQ93100 1093 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 ASIC4Q96FT7 647 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 CEP89Q96ST8 783 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 DISC1Q9NRI5 854 aa12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 MYH9P35579 1960 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-230ENST00000557201 WDR81Q562E7 1941 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 A0A0U1RQF3 1178 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 HOXA2O43364 376 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 STBD1O95210 358 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 OATP04181 439 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 DARSP14868 501 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 PBX3P40426 434 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 USP11P51784 963 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 PLPP4Q5VZY2 271 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 LRRC43Q8N309 656 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 PBXIP1Q96AQ6 731 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 RPGRIP1Q96KN7 1286 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 MAP7D2Q96T17 732 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 RIT2Q99578 217 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 TCF25Q9BQ70 676 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 RNF26Q9BY78 433 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 NGRNQ9NPE2 291 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 AKT3Q9Y243 479 aa12.09□□□□□ -0.47
HNRNPC-230ENST00000557201 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 PSMD10O75832 226 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 IFNAR1P17181 557 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 TMOD1P28289 359 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 PRKCEQ02156 737 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 SIGLEC14Q08ET2 396 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 TCF15Q12870 199 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 DRP2Q13474 957 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 SLC39A11Q8N1S5 342 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 BICD2Q8TD16 824 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 ZNF274Q96GC6 653 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 ZNF668Q96K58 619 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 ZNF558Q96NG5 402 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 PHOX2BQ99453 314 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 TRAIPQ9BWF2 469 aa12.08□□□□□ -0.48
HNRNPC-230ENST00000557201 NIFKQ9BYG3 293 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms