RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 RIPOR2Q9Y4F9 1068 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 FHOD1Q9Y613 1164 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 PHLPP1O60346 1717 aa5.3□□□□□ -1.56
SRP54-212ENST00000556992 PALLDQ8WX93 1383 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 RAD50Q92878 1312 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 DLG5Q8TDM6 1919 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 A0A1B0GUL7 405 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 CBFA2T2O43439 604 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 RPS6KA4O75676 772 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 CAMTA2O94983 1202 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 TBC1D8O95759 1140 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 PTMSP20962 102 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 DDIT3P35638 169 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 NOP2P46087 812 aaKnown RBP5.29□□□□□ -1.56
SRP54-212ENST00000556992 KCNJ4P48050 445 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 SARSP49591 514 aaKnown RBP5.29□□□□□ -1.56
SRP54-212ENST00000556992 NUCB2P80303 420 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 DPY19L1Q2PZI1 675 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 CCDC152Q4G0S7 254 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 MCMDC2Q4G0Z9 681 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 LRRC24Q50LG9 513 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 METTL24Q5JXM2 366 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 SLC10A5Q5PT55 438 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 SUSD4Q5VX71 490 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 UNC5AQ6ZN44 842 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 STK32CQ86UX6 486 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 KIAA0825Q8IV33 1275 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 KBTBD3Q8NAB2 608 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 SLC16A11Q8NCK7 471 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 SPON2Q9BUD6 331 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 CNNM1Q9NRU3 951 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 HELLSQ9NRZ9 838 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 PPT2Q9UMR5 302 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 NIP7Q9Y221 180 aaKnown RBP eCLIP5.29□□□□□ -1.56
SRP54-212ENST00000556992 NHSL1Q5SYE7 1610 aa5.29□□□□□ -1.56
SRP54-212ENST00000556992 COL14A1Q05707 1796 aaKnown RBP5.29□□□□□ -1.56
SRP54-212ENST00000556992 MROH5Q6ZUA9 1318 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 RNF113AO15541 343 aaKnown RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 FRAT2O75474 233 aaPredicted RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 PDE8BO95263 885 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 ZFYP08048 801 aaPredicted RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 IFIT1P09914 478 aaKnown RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 UQCRFS1P1P0C7P4 283 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 ITGA4P13612 1032 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 PDIA4P13667 645 aaKnown RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 POU4F1Q01851 419 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 KRT32Q14532 448 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 NECTIN1Q15223 517 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 TTF1Q15361 905 aaPredicted RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 ATP2B3Q16720 1220 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 TTC39AQ5SRH9 613 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 ZSCAN25Q6NSZ9 544 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 SYNE4Q8N205 404 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 ADAMTS17Q8TE56 1095 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 LPIN2Q92539 896 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 ZSCAN31Q96LW9 406 aaPredicted RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 GBP4Q96PP9 640 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 FERD3LQ96RJ6 166 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 DNAJC2Q99543 621 aaKnown RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 MPHOSPH8Q99549 860 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 PUS3Q9BZE2 481 aaKnown RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 NYXQ9GZU5 481 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 SCAND2PQ9GZW5 306 aaPredicted RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 ALDH8A1Q9H2A2 487 aaPredicted RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 GREM2Q9H772 168 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 PAG1Q9NWQ8 432 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 HMG20BQ9P0W2 317 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 NTMQ9P121 344 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 NARFQ9UHQ1 456 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 LIMCH1Q9UPQ0 1083 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 SF3B6Q9Y3B4 125 aaKnown RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 SNX14Q9Y5W7 946 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 CYP46A1Q9Y6A2 500 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 KDM3BQ7LBC6 1761 aa5.28□□□□□ -1.56
SRP54-212ENST00000556992 GOLGB1Q14789 3259 aaKnown RBP5.28□□□□□ -1.56
SRP54-212ENST00000556992 CCDC171Q6TFL3 1326 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 COL22A1Q8NFW1 1626 aaPredicted RBP5.27□□□□□ -1.57
SRP54-212ENST00000556992 GOLGA6L22H0YM25 854 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 GOLIM4O00461 696 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 TAF5LO75529 589 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 HMGB1P09429 215 aaKnown RBP5.27□□□□□ -1.57
SRP54-212ENST00000556992 ZNF20P17024 532 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 YY1P25490 414 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 IGHMBP2P38935 993 aaKnown RBP5.27□□□□□ -1.57
SRP54-212ENST00000556992 CORO7P57737 925 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 PTH1RQ03431 593 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 ANKRD1Q15327 319 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 SF3B3Q15393 1217 aaKnown RBP5.27□□□□□ -1.57
SRP54-212ENST00000556992 PUM3Q15397 648 aaKnown RBP5.27□□□□□ -1.57
SRP54-212ENST00000556992 TBC1D10BQ4KMP7 808 aaPredicted RBP5.27□□□□□ -1.57
SRP54-212ENST00000556992 ANKRD39Q53RE8 183 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 VPS53Q5VIR6 699 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 CREB3L3Q68CJ9 461 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 CLEC17AQ6ZS10 378 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 LZTR1Q8N653 840 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 CHMP4CQ96CF2 233 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 TSPAN17Q96FV3 270 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 TMX3Q96JJ7 454 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 FAM227BQ96M60 508 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 CDC5LQ99459 802 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms