RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 NFE2L3Q9Y4A8 694 aa26.22■■□□□ 1.79
SIX4-203ENST00000556952 UBE4BO95155 1302 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 HBP1O60381 514 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 ADAMTS4O75173 837 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 DUSP11O75319 330 aaKnown RBP26.21■■□□□ 1.79
SIX4-203ENST00000556952 PLS3P13797 630 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 CPT1AP50416 773 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 STX17P56962 302 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 BRDTQ58F21 947 aaPredicted RBP26.21■■□□□ 1.79
SIX4-203ENST00000556952 ODR4Q5SWX8 454 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 FAM102BQ5T8I3 360 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 STXBP4Q6ZWJ1 553 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 EPM2AIP1Q7L775 607 aaPredicted RBP26.21■■□□□ 1.79
SIX4-203ENST00000556952 UBE2Q1Q7Z7E8 422 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 FAM178BQ8IXR5 827 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 SLC17A8Q8NDX2 589 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 SLC7A3Q8WY07 619 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 AP5M1Q9H0R1 490 aa26.21■■□□□ 1.79
SIX4-203ENST00000556952 SFI1A8K8P3 1242 aa26.2■■□□□ 1.79
SIX4-203ENST00000556952 EIF3DO15371 548 aaKnown RBP eCLIP26.2■■□□□ 1.79
SIX4-203ENST00000556952 MYCNP04198 464 aaPredicted RBP26.2■■□□□ 1.79
SIX4-203ENST00000556952 RGS19P49795 217 aa26.2■■□□□ 1.79
SIX4-203ENST00000556952 RTP1P59025 263 aa26.2■■□□□ 1.79
SIX4-203ENST00000556952 EMC2Q15006 297 aa26.2■■□□□ 1.79
SIX4-203ENST00000556952 CENPPQ6IPU0 288 aa26.2■■□□□ 1.79
SIX4-203ENST00000556952 MAEAQ7L5Y9 396 aa26.2■■□□□ 1.79
SIX4-203ENST00000556952 GLIS3Q8NEA6 775 aa26.2■■□□□ 1.79
SIX4-203ENST00000556952 C16orf70Q9BSU1 422 aa26.2■■□□□ 1.79
SIX4-203ENST00000556952 FGFBP2Q9BYJ0 223 aa26.2■■□□□ 1.79
SIX4-203ENST00000556952 TRPC6Q9Y210 931 aa26.2■■□□□ 1.79
SIX4-203ENST00000556952 MYADML2A6NDP7 307 aa26.2■■□□□ 1.78
SIX4-203ENST00000556952 GAS2O43903 313 aaKnown RBP26.2■■□□□ 1.78
SIX4-203ENST00000556952 LRRC41Q15345 812 aa26.2■■□□□ 1.78
SIX4-203ENST00000556952 BMT2Q1RMZ1 405 aa26.2■■□□□ 1.78
SIX4-203ENST00000556952 ANKLE1Q8NAG6 615 aa26.2■■□□□ 1.78
SIX4-203ENST00000556952 SCFD1Q8WVM8 642 aa26.2■■□□□ 1.78
SIX4-203ENST00000556952 FIZ1Q96SL8 496 aa26.2■■□□□ 1.78
SIX4-203ENST00000556952 HSD3B7Q9H2F3 369 aa26.2■■□□□ 1.78
SIX4-203ENST00000556952 XPNPEP1Q9NQW7 623 aa26.2■■□□□ 1.78
SIX4-203ENST00000556952 ALPK3Q96L96 1907 aa26.19■■□□□ 1.78
SIX4-203ENST00000556952 GCNT3O95395 438 aa26.19■■□□□ 1.78
SIX4-203ENST00000556952 ZNF286BP0CG31 522 aa26.19■■□□□ 1.78
SIX4-203ENST00000556952 LRRC63Q05C16 580 aa26.19■■□□□ 1.78
SIX4-203ENST00000556952 ALCAMQ13740 583 aa26.19■■□□□ 1.78
SIX4-203ENST00000556952 TPD52L1Q16890 204 aaPredicted RBP26.19■■□□□ 1.78
SIX4-203ENST00000556952 TTI2Q6NXR4 508 aa26.19■■□□□ 1.78
SIX4-203ENST00000556952 SARM1Q6SZW1 724 aa26.19■■□□□ 1.78
SIX4-203ENST00000556952 PAWRQ96IZ0 340 aaKnown RBP26.19■■□□□ 1.78
SIX4-203ENST00000556952 JPH2Q9BR39 696 aaPredicted RBP26.19■■□□□ 1.78
SIX4-203ENST00000556952 POLD4Q9HCU8 107 aa26.19■■□□□ 1.78
SIX4-203ENST00000556952 FANCLQ9NW38 375 aa26.19■■□□□ 1.78
SIX4-203ENST00000556952 COL1A2P08123 1366 aa26.18■■□□□ 1.78
SIX4-203ENST00000556952 H3BRB1 525 aa26.18■■□□□ 1.78
SIX4-203ENST00000556952 MAFO75444 373 aaPredicted RBP26.18■■□□□ 1.78
SIX4-203ENST00000556952 CAPN2P17655 700 aa26.18■■□□□ 1.78
SIX4-203ENST00000556952 CASP5P51878 434 aa26.18■■□□□ 1.78
SIX4-203ENST00000556952 UPF3AQ9H1J1 476 aaKnown RBP26.18■■□□□ 1.78
SIX4-203ENST00000556952 TUT1Q9H6E5 874 aaKnown RBP26.18■■□□□ 1.78
SIX4-203ENST00000556952 GPRC5CQ9NQ84 441 aa26.18■■□□□ 1.78
SIX4-203ENST00000556952 KCNG1Q9UIX4 513 aa26.18■■□□□ 1.78
SIX4-203ENST00000556952 MYBP10242 640 aa26.17■■□□□ 1.78
SIX4-203ENST00000556952 PMS1P54277 932 aaKnown RBP26.17■■□□□ 1.78
SIX4-203ENST00000556952 GJA9P57773 515 aa26.17■■□□□ 1.78
SIX4-203ENST00000556952 TBC1D8BQ0IIM8 1120 aa26.17■■□□□ 1.78
SIX4-203ENST00000556952 DMP1Q13316 513 aaPredicted RBP26.17■■□□□ 1.78
SIX4-203ENST00000556952 ZNF484Q5JVG2 852 aa26.17■■□□□ 1.78
SIX4-203ENST00000556952 ZNF720Q7Z2F6 126 aa26.17■■□□□ 1.78
SIX4-203ENST00000556952 ZNF507Q8TCN5 953 aa26.17■■□□□ 1.78
SIX4-203ENST00000556952 TSG101Q99816 390 aa26.17■■□□□ 1.78
SIX4-203ENST00000556952 ST6GALNAC4Q9H4F1 302 aa26.17■■□□□ 1.78
SIX4-203ENST00000556952 PCDHB13Q9Y5F0 798 aa26.17■■□□□ 1.78
SIX4-203ENST00000556952 TRIM49BA6NDI0 452 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 ZBTB42B2RXF5 422 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 DNM1LO00429 736 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 C6orf222P0C671 652 aaPredicted RBP26.16■■□□□ 1.78
SIX4-203ENST00000556952 ZNF18P17022 549 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 ARRDC4Q8NCT1 418 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 KLHDC9Q8NEP7 349 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 NOC3LQ8WTT2 800 aaKnown RBP26.16■■□□□ 1.78
SIX4-203ENST00000556952 SEMA6BQ9H3T3 888 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 RNPEPQ9H4A4 650 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 F2P00734 622 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 NMT1P30419 496 aaKnown RBP26.16■■□□□ 1.78
SIX4-203ENST00000556952 DEKP35659 375 aaKnown RBP26.16■■□□□ 1.78
SIX4-203ENST00000556952 SMTNP53814 917 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 NCKAP1LP55160 1127 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 PLCB2Q00722 1185 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 BEX3Q00994 111 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 CDKAL1Q5VV42 579 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 PPP4R3CPQ6ZMV5 832 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 SPIRE2Q8WWL2 714 aa26.16■■□□□ 1.78
SIX4-203ENST00000556952 POLR3FQ9H1D9 316 aaPredicted RBP26.16■■□□□ 1.78
SIX4-203ENST00000556952 K7ENM7 598 aa26.15■■□□□ 1.78
SIX4-203ENST00000556952 PPP1R37O75864 691 aa26.15■■□□□ 1.78
SIX4-203ENST00000556952 PEX3P56589 373 aa26.15■■□□□ 1.78
SIX4-203ENST00000556952 FSCN1Q16658 493 aaKnown RBP26.15■■□□□ 1.78
SIX4-203ENST00000556952 KNOP1Q1ED39 458 aaKnown RBP26.15■■□□□ 1.78
SIX4-203ENST00000556952 ZCWPW2Q504Y3 356 aa26.15■■□□□ 1.78
SIX4-203ENST00000556952 ANKRD40Q6AI12 368 aa26.15■■□□□ 1.78
SIX4-203ENST00000556952 RNF180Q86T96 592 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms