RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 XKR9Q5GH70 373 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 POTEGQ6S5H5 508 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 RHPN2Q8IUC4 686 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 C4orf32Q8N8J7 132 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 SP7Q8TDD2 431 aaPredicted RBP11.6□□□□□ -0.55
SNX6-208ENST00000556712 PPM1EQ8WY54 764 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 TMEM143Q96AN5 459 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 NLRP4Q96MN2 994 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 HSD17B14Q9BPX1 270 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 TSPYL2Q9H2G4 693 aaPredicted RBP11.6□□□□□ -0.55
SNX6-208ENST00000556712 RC3H2Q9HBD1 1191 aaKnown RBP11.6□□□□□ -0.55
SNX6-208ENST00000556712 SUCLA2Q9P2R7 463 aaPredicted RBP11.6□□□□□ -0.55
SNX6-208ENST00000556712 INSL6Q9Y581 213 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 ADGRA3Q8IWK6 1321 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 A0A087WZ62 844 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 DENND3A2RUS2 1198 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 SPATA31C1P0DKV0 1188 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 DARSP14868 501 aaKnown RBP11.59□□□□□ -0.55
SNX6-208ENST00000556712 PTGDRQ13258 359 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 GRB10Q13322 594 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 ORC2Q13416 577 aaPredicted RBP11.59□□□□□ -0.55
SNX6-208ENST00000556712 LARP1BQ659C4 914 aaKnown RBP11.59□□□□□ -0.55
SNX6-208ENST00000556712 MICALL1Q8N3F8 863 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 NEK9Q8TD19 979 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 PIGOQ8TEQ8 1089 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 SLC7A3Q8WY07 619 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 ADAM2Q99965 735 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 FDXACB1Q9BRP7 624 aaPredicted RBP11.59□□□□□ -0.55
SNX6-208ENST00000556712 FTHL17Q9BXU8 183 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 DHX33Q9H6R0 707 aaKnown RBP11.59□□□□□ -0.55
SNX6-208ENST00000556712 XPNPEP1Q9NQW7 623 aa11.59□□□□□ -0.55
SNX6-208ENST00000556712 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.59□□□□□ -0.55
SNX6-208ENST00000556712 MYH15Q9Y2K3 1946 aa11.58□□□□□ -0.55
SNX6-208ENST00000556712 VPS37CA5D8V6 355 aaPredicted RBP11.58□□□□□ -0.56
SNX6-208ENST00000556712 K7ELQ4 463 aaPredicted RBP11.58□□□□□ -0.56
SNX6-208ENST00000556712 GPR182O15218 404 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 LPXNO60711 386 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 USO1O60763 962 aaKnown RBP11.58□□□□□ -0.56
SNX6-208ENST00000556712 LYPLA2O95372 231 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 EIF4BP23588 611 aaKnown RBP11.58□□□□□ -0.56
SNX6-208ENST00000556712 RFC5P40937 340 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 ERVK-21P61565 698 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 DSC3Q14574 896 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 CCDC85BQ15834 202 aaPredicted RBP11.58□□□□□ -0.56
SNX6-208ENST00000556712 ECM1Q16610 540 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 PAN2Q504Q3 1202 aaKnown RBP11.58□□□□□ -0.56
SNX6-208ENST00000556712 FERMT3Q86UX7 667 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 CATSPER3Q86XQ3 398 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 NPAS4Q8IUM7 802 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 CCDC43Q96MW1 224 aaKnown RBP11.58□□□□□ -0.56
SNX6-208ENST00000556712 TGS1Q96RS0 853 aaKnown RBP11.58□□□□□ -0.56
SNX6-208ENST00000556712 MTRQ99707 1265 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 PRDM6Q9NQX0 595 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 COL4A3BPQ9Y5P4 624 aa11.58□□□□□ -0.56
SNX6-208ENST00000556712 PP2D1A8MPX8 630 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 SARSP49591 514 aaKnown RBP11.57□□□□□ -0.56
SNX6-208ENST00000556712 RARRES1P49788 294 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 DNM2P50570 870 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNX6-208ENST00000556712 IL17AQ16552 155 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 RILPL1Q5EBL4 403 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 OTUD6AQ7L8S5 288 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 CRIPAKQ8N1N5 446 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 FIBCD1Q8N539 461 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 FBXO22Q8NEZ5 403 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 ERMNQ8TAM6 284 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 PRPF31Q8WWY3 499 aaKnown RBP11.57□□□□□ -0.56
SNX6-208ENST00000556712 JPH2Q9BR39 696 aaPredicted RBP11.57□□□□□ -0.56
SNX6-208ENST00000556712 GCOM2Q9BZD3 368 aaPredicted RBP11.57□□□□□ -0.56
SNX6-208ENST00000556712 ATP6V0A4Q9HBG4 840 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 TUFT1Q9NNX1 390 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 RGS18Q9NS28 235 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 ANKEF1Q9NU02 776 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 HCSTQ9UBK5 93 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 PLXNA4Q9HCM2 1894 aa11.57□□□□□ -0.56
SNX6-208ENST00000556712 C9IYK1 514 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 TRANK1O15050 2925 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 DGKIO75912 1065 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 CSPG5O95196 566 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 LINC00271P0C7V0 271 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 SRGAP2CP0DJJ0 459 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 FGFR1P11362 822 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 CDC25AP30304 524 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 CTNNB1P35222 781 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 CCT6AP40227 531 aaKnown RBP11.56□□□□□ -0.56
SNX6-208ENST00000556712 LAMTOR4Q0VGL1 99 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 BTG3Q14201 252 aaPredicted RBP11.56□□□□□ -0.56
SNX6-208ENST00000556712 EPC2Q52LR7 807 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 ODR4Q5SWX8 454 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 MAEAQ7L5Y9 396 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 ZNF410Q86VK4 478 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 IGSF22Q8N9C0 903 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 ASAP3Q8TDY4 903 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 SNX29Q8TEQ0 813 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 PSPC1Q8WXF1 523 aaKnown RBP11.56□□□□□ -0.56
SNX6-208ENST00000556712 ZNF689Q96CS4 500 aaPredicted RBP11.56□□□□□ -0.56
SNX6-208ENST00000556712 POLR3CQ9BUI4 534 aaPredicted RBP11.56□□□□□ -0.56
SNX6-208ENST00000556712 MINDY3Q9H8M7 445 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 IFT122Q9HBG6 1241 aa11.56□□□□□ -0.56
SNX6-208ENST00000556712 GPRC5CQ9NQ84 441 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms