RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SPECC1L-ADORA2AF8WAN1 911 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 EBAG9O00559 213 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 TACC1O75410 805 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 ITGB1P05556 798 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 UBL4AP11441 157 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 EPHA1P21709 976 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 HALP42357 657 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 MTHFRP42898 656 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 ACADSBP45954 432 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 ACADVLP49748 655 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 SERPINB8P50452 374 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 GUCY2FP51841 1108 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 TUBB4BP68371 445 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 MAP3K10Q02779 954 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 SULT2A1Q06520 285 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 FAAP100Q0VG06 881 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 CETN1Q12798 172 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 GRSF1Q12849 480 aaKnown RBP eCLIP6.74□□□□□ -1.33
TDP1-215ENST00000556498 COL9A3Q14050 684 aaPredicted RBP6.74□□□□□ -1.33
TDP1-215ENST00000556498 LRP8Q14114 963 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 HLTFQ14527 1009 aaKnown RBP eCLIP6.74□□□□□ -1.33
TDP1-215ENST00000556498 ZNF423Q2M1K9 1284 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 SLC44A4Q53GD3 710 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 PPP4R3AQ6IN85 833 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 SWSAP1Q6NVH7 229 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 HIBCHQ6NVY1 386 aaPredicted RBP6.74□□□□□ -1.33
TDP1-215ENST00000556498 CFAP161Q6P656 301 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 ILDR2Q71H61 639 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 RALYLQ86SE5 291 aaKnown RBP6.74□□□□□ -1.33
TDP1-215ENST00000556498 PHLDB2Q86SQ0 1253 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 CABP7Q86V35 215 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 METTL16Q86W50 562 aaKnown RBP6.74□□□□□ -1.33
TDP1-215ENST00000556498 SPATA2LQ8IUW3 424 aaPredicted RBP6.74□□□□□ -1.33
TDP1-215ENST00000556498 FAM186BQ8IYM0 893 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 CPXCR1Q8N123 301 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 SCAIQ8N9R8 606 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 GOLM1Q8NBJ4 401 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 OR8H1Q8NGG4 311 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 IRGQQ8WZA9 623 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 RNF34Q969K3 372 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 AIFM2Q9BRQ8 373 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 ALG1Q9BT22 464 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 NOC4LQ9BVI4 516 aaKnown RBP6.74□□□□□ -1.33
TDP1-215ENST00000556498 CEP44Q9C0F1 390 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 NCOR1P1Q9H4R4 102 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 BICC1Q9H694 974 aaKnown RBP6.74□□□□□ -1.33
TDP1-215ENST00000556498 C8orf33Q9H7E9 229 aaPredicted RBP6.74□□□□□ -1.33
TDP1-215ENST00000556498 SEC31BQ9NQW1 1179 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 ENAMQ9NRM1 1142 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 MOCS1Q9NZB8 636 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 HERC5Q9UII4 1024 aaKnown RBP6.74□□□□□ -1.33
TDP1-215ENST00000556498 HOOK1Q9UJC3 728 aaKnown RBP6.74□□□□□ -1.33
TDP1-215ENST00000556498 SLC4A4Q9Y6R1 1079 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 CEP162Q5TB80 1403 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 DHX57Q6P158 1386 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 KIF15Q9NS87 1388 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 CUX1P39880 1505 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 GNAT3A8MTJ3 354 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 HAT1O14929 419 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 PLSCR1O15162 318 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 TLR3O15455 904 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 EXTL3O43909 919 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 PFDN1O60925 122 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 DDHD2O94830 711 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 ARHGEF15O94989 841 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 ESRRAP11474 423 aaPredicted RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 NID1P14543 1247 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 PRLRP16471 622 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 ZKSCAN1P17029 563 aaPredicted RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 ZNF3P17036 446 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 IL10P22301 178 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 ADD2P35612 726 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 DDIT3P35638 169 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 STAT3P40763 770 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 CD97P48960 835 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 MAPKAPK2P49137 400 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 DGKGP49619 791 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 RARSP54136 660 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 ALDH18A1P54886 795 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 ST5P78524 1137 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 MRPS25P82663 173 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 MRPS15P82914 257 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 ROR1Q01973 937 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 PCDH1Q08174 1060 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 TCIRG1Q13488 830 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 PUM3Q15397 648 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 INSCQ1MX18 579 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 ZSCAN23Q3MJ62 389 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 CCDC40Q4G0X9 1142 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 GKAP1Q5VSY0 366 aaPredicted RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 METTL11BQ5VVY1 283 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 C9orf131Q5VYM1 1079 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 INTS3Q68E01 1043 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 TMEM53Q6P2H8 277 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 NEK5Q6P3R8 708 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 CWC27Q6UX04 472 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 SV2BQ7L1I2 683 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 YTHDF3Q7Z739 585 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 FERMT3Q86UX7 667 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 CKAP2LQ8IYA6 745 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms