RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 YOD1Q5VVQ6 348 aaPredicted RBP6.25□□□□□ -1.41
SRP54-211ENST00000556445 SPATC1Q76KD6 591 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 PCGF5Q86SE9 256 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 SAPCD2Q86UD0 394 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 NOX5Q96PH1 765 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 FEZ1Q99689 392 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 ARNT2Q9HBZ2 717 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 GPR27Q9NS67 375 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 PALD1Q9ULE6 856 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 PMF1-BGLAPU3KQ54 211 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 USP54Q70EL1 1684 aa6.25□□□□□ -1.41
SRP54-211ENST00000556445 SBNO1A3KN83 1393 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 FLT4P35916 1363 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 PDPK1O15530 556 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 MCCP23508 829 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 PRKAR2BP31323 418 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 RASGRF1Q13972 1273 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 SYCP2LQ5T4T6 812 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 FAM43BQ6ZT52 329 aaPredicted RBP6.24□□□□□ -1.41
SRP54-211ENST00000556445 C16orf86Q6ZW13 317 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 USP53Q70EK8 1073 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 LRRC47Q8N1G4 583 aaKnown RBP6.24□□□□□ -1.41
SRP54-211ENST00000556445 NAP1L4Q99733 375 aaKnown RBP6.24□□□□□ -1.41
SRP54-211ENST00000556445 PHF20Q9BVI0 1012 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 CCDC113Q9H0I3 377 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 ZCCHC4Q9H5U6 513 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 CHST12Q9NRB3 414 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 CLDND1Q9NY35 253 aa6.24□□□□□ -1.41
SRP54-211ENST00000556445 RGPD8O14715 1765 aaPredicted RBP6.23□□□□□ -1.41
SRP54-211ENST00000556445 RTL1A6NKG5 1358 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 TRAV20A0A0B4J274 112 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 ADCY3O60266 1144 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 KRT18P05783 430 aaKnown RBP6.23□□□□□ -1.41
SRP54-211ENST00000556445 CD53P19397 219 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 GNAI1P63096 354 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 POU5F1BQ06416 359 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 ZRSR2Q15696 482 aaKnown RBP6.23□□□□□ -1.41
SRP54-211ENST00000556445 RSPO2Q6UXX9 243 aaPredicted RBP6.23□□□□□ -1.41
SRP54-211ENST00000556445 NSMFQ6X4W1 530 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 ETV3LQ6ZN32 361 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 KCNH5Q8NCM2 988 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 EXOC6Q8TAG9 804 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 C20orf173Q96LM9 149 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 DNAJC7Q99615 494 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 ARPC5LQ9BPX5 153 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 SYT3Q9BQG1 590 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 SPATA9Q9BWV2 254 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 XYLT2Q9H1B5 865 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 CHMP4BQ9H444 224 aaKnown RBP6.23□□□□□ -1.41
SRP54-211ENST00000556445 LUC7LQ9NQ29 371 aaKnown RBP6.23□□□□□ -1.41
SRP54-211ENST00000556445 ZNF652Q9Y2D9 606 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 ATP8A1Q9Y2Q0 1164 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 COA3Q9Y2R0 106 aaPredicted RBP6.23□□□□□ -1.41
SRP54-211ENST00000556445 RRP7AQ9Y3A4 280 aaKnown RBP6.23□□□□□ -1.41
SRP54-211ENST00000556445 DCCP43146 1447 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 KIF1AQ12756 1690 aa6.23□□□□□ -1.41
SRP54-211ENST00000556445 ARHGEF10O15013 1369 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 A0A0G2JLL6 359 aaPredicted RBP6.22□□□□□ -1.41
SRP54-211ENST00000556445 A0A1B0GTL3 188 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 SH3D21A4FU49 640 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 CFAP69A5D8W1 941 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 IPO8O15397 1037 aaKnown RBP6.22□□□□□ -1.41
SRP54-211ENST00000556445 KCNQ2O43526 872 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 TADA3O75528 432 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 MYL1P05976 194 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 POU3F3P20264 500 aaPredicted RBP6.22□□□□□ -1.41
SRP54-211ENST00000556445 AMPHP49418 695 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 RARSP54136 660 aaKnown RBP6.22□□□□□ -1.41
SRP54-211ENST00000556445 EPHB1P54762 984 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 SQSTM1Q13501 440 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 RRS1Q15050 365 aaKnown RBP6.22□□□□□ -1.41
SRP54-211ENST00000556445 TKFCQ3LXA3 575 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 ALDH1L2Q3SY69 923 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 EMC4Q5J8M3 183 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 KCNT2Q6UVM3 1135 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 LIPIQ6XZB0 460 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 MILR1Q7Z6M3 343 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 FAM126BQ8IXS8 530 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 ADGRG2Q8IZP9 1017 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 FAM26EQ8N5C1 309 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 SYT8Q8NBV8 401 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.22□□□□□ -1.41
SRP54-211ENST00000556445 DCAF4Q8WV16 495 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 DDX11Q96FC9 970 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 CHAMP1Q96JM3 812 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 ZNF700Q9H0M5 742 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 CASS4Q9NQ75 786 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 MAP3K20Q9NYL2 800 aaKnown RBP6.22□□□□□ -1.41
SRP54-211ENST00000556445 PPARGC1AQ9UBK2 798 aaKnown RBP6.22□□□□□ -1.41
SRP54-211ENST00000556445 KIF16BQ96L93 1317 aa6.22□□□□□ -1.41
SRP54-211ENST00000556445 BLACEA4D250 179 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 TCERG1O14776 1098 aaKnown RBP6.21□□□□□ -1.42
SRP54-211ENST00000556445 HTATSF1O43719 755 aaKnown RBP6.21□□□□□ -1.42
SRP54-211ENST00000556445 ALDH1L1O75891 902 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 CYP2C8P10632 490 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 SLURP1P55000 103 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 EIF4A2Q14240 407 aaKnown RBP6.21□□□□□ -1.42
SRP54-211ENST00000556445 HLTFQ14527 1009 aaKnown RBP eCLIP6.21□□□□□ -1.42
SRP54-211ENST00000556445 BRD3Q15059 726 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms