RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 IER5Q5VY09 327 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 KRBA2Q6ZNG9 492 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 KSR1Q8IVT5 923 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 LINC01465Q8N7H1 131 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 CAGE1Q8TC20 777 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 PRPF31Q8WWY3 499 aaKnown RBP15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 DDX12PQ92771 950 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 REEP2Q9BRK0 252 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 NOC4LQ9BVI4 516 aaKnown RBP15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 TNMDQ9H2S6 317 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 MAGEF1Q9HAY2 307 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 KCND2Q9NZV8 630 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 USP25Q9UHP3 1055 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 TBX21Q9UL17 535 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 UMODL1Q5DID0 1318 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 TRIM43BA6NCK2 446 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 MYMKA6NI61 221 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 SFI1A8K8P3 1242 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 KINO60870 393 aaKnown RBP15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 TBCAO75347 108 aaKnown RBP15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 IDEP14735 1019 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 RAG1P15918 1043 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 GUCY2CP25092 1073 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 CASP1P29466 404 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 CYP2C18P33260 490 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 MCM4P33991 863 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 CCL23P55773 120 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 MRPS6P82932 125 aaKnown RBP15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 SNW1Q13573 536 aaKnown RBP15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 TRIM71Q2Q1W2 868 aaKnown RBP15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 ZNF618Q5T7W0 954 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 ENGASEQ8NFI3 743 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 NLRP7Q8WX94 980 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 TRIM43Q96BQ3 446 aaPredicted RBP15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 PAGE5Q96GU1 130 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 LRRC27Q9C0I9 530 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 BLZF1Q9H2G9 400 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 KBTBD4Q9NVX7 518 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 DACT1Q9NYF0 836 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 ZMYND8Q9ULU4 1186 aaPredicted RBP15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 COL4A3BPQ9Y5P4 624 aa15.57■□□□□ 0.08
VIPAS39-208ENST00000556412 RSPH10B2B2RC85 870 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 RBAK-RBAKDNI3L0D1 243 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 RSPH10BP0C881 870 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 SRGAP2CP0DJJ0 459 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 NLRP11P59045 1033 aaKnown RBP15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 LAMTOR4Q0VGL1 99 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 LRRC8DQ7L1W4 858 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 NME8Q8N427 588 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 ASAP3Q8TDY4 903 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 KIFAP3Q92845 792 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 CCDC34Q96HJ3 373 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 DRC1Q96MC2 740 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 CDY2AQ9Y6F7 541 aa15.56■□□□□ 0.08
VIPAS39-208ENST00000556412 FAM13AO94988 1023 aa15.55■□□□□ 0.08
VIPAS39-208ENST00000556412 RPLP2P05387 115 aaKnown RBP15.55■□□□□ 0.08
VIPAS39-208ENST00000556412 SELPP16109 830 aa15.55■□□□□ 0.08
VIPAS39-208ENST00000556412 ARL2P36404 184 aa15.55■□□□□ 0.08
VIPAS39-208ENST00000556412 ASIC1P78348 528 aa15.55■□□□□ 0.08
VIPAS39-208ENST00000556412 GIT2Q14161 759 aa15.55■□□□□ 0.08
VIPAS39-208ENST00000556412 SCLYQ96I15 445 aa15.55■□□□□ 0.08
VIPAS39-208ENST00000556412 IFT74Q96LB3 600 aa15.55■□□□□ 0.08
VIPAS39-208ENST00000556412 OSMRQ99650 979 aa15.55■□□□□ 0.08
VIPAS39-208ENST00000556412 TIPINQ9BVW5 301 aa15.55■□□□□ 0.08
VIPAS39-208ENST00000556412 TRPV2Q9Y5S1 764 aa15.55■□□□□ 0.08
VIPAS39-208ENST00000556412 LRRIQ4A6NIV6 560 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 GLRA2P23416 452 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 GPC3P51654 580 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 MXD4Q14582 209 aaPredicted RBP15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 DAW1Q8N136 415 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 RNF149Q8NC42 400 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 CELF4Q9BZC1 486 aaKnown RBP15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 TRIM9Q9C026 710 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 DNAH12Q6ZR08 3092 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 MKI67P46013 3256 aaKnown RBP15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 A0A087WZ62 844 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 CCDC169A6NNP5 214 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 KIAA0355O15063 1070 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 CAND2O75155 1236 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 CHRNA1P02708 482 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 ITGB8P26012 769 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 PEX3P56589 373 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 MAPK7Q13164 816 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 CUL4BQ13620 913 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 CAPSQ13938 189 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 TFDP1Q14186 410 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 RPAINQ86UA6 219 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 MYCT1Q8N699 235 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 BSNDQ8WZ55 320 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 FDXACB1Q9BRP7 624 aaPredicted RBP15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 WNT8AQ9H1J5 351 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 CDHR5Q9HBB8 845 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 ODF2LQ9ULJ1 636 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 NR2E3Q9Y5X4 410 aa15.54■□□□□ 0.08
VIPAS39-208ENST00000556412 GPR32O75388 356 aa15.53■□□□□ 0.08
VIPAS39-208ENST00000556412 TIMP1P01033 207 aa15.53■□□□□ 0.08
VIPAS39-208ENST00000556412 PRR29P0C7W0 189 aa15.53■□□□□ 0.08
VIPAS39-208ENST00000556412 DMP1Q13316 513 aaPredicted RBP15.53■□□□□ 0.08
VIPAS39-208ENST00000556412 ODR4Q5SWX8 454 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms