RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PLEKHG4Q58EX7 1191 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 IER5Q5VY09 327 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 ARL6IP4Q66PJ3 421 aaKnown RBP10.8□□□□□ -0.68
SRP54-210ENST00000556380 PLA2G4FQ68DD2 849 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 EFCAB12Q6NXP0 572 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 FAM173BQ6P4H8 233 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 OTOP2Q7RTS6 562 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 RSPH3Q86UC2 560 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 TPH2Q8IWU9 490 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 DBF4BQ8NFT6 615 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 RNPC3Q96LT9 517 aaKnown RBP10.8□□□□□ -0.68
SRP54-210ENST00000556380 SH2D3AQ9BRG2 576 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 MMTAG2Q9BU76 263 aaKnown RBP10.8□□□□□ -0.68
SRP54-210ENST00000556380 DHX33Q9H6R0 707 aaKnown RBP10.8□□□□□ -0.68
SRP54-210ENST00000556380 TUFT1Q9NNX1 390 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 CYP26B1Q9NR63 512 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 ANKEF1Q9NU02 776 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 PPME1Q9Y570 386 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 CDY2AQ9Y6F7 541 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 SQORQ9Y6N5 450 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 WDR81Q562E7 1941 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 SCN5AQ14524 2016 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 A0A087WWV3 80 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 GPR32O75388 356 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 PDIA4P13667 645 aaKnown RBP10.79□□□□□ -0.68
SRP54-210ENST00000556380 TMEM62Q0P6H9 643 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 DRP2Q13474 957 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 PKP1Q13835 747 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 LPIN1Q14693 890 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 PTPAQ15257 358 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 SF3A1Q15459 793 aaKnown RBP10.79□□□□□ -0.68
SRP54-210ENST00000556380 MTERF2Q49AM1 385 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 FBXO47Q5MNV8 452 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 FAM109BQ6ICB4 259 aaPredicted RBP10.79□□□□□ -0.68
SRP54-210ENST00000556380 CNKSR3Q6P9H4 555 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 DTHD1Q6ZMT9 781 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 LRRC71Q8N4P6 559 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 METTL13Q8N6R0 699 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 TATDN2Q93075 761 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 CELF4Q9BZC1 486 aaKnown RBP10.79□□□□□ -0.68
SRP54-210ENST00000556380 FTOQ9C0B1 505 aaKnown RBP eCLIP10.79□□□□□ -0.68
SRP54-210ENST00000556380 ADAMTS10Q9H324 1103 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 ZSCAN16Q9H4T2 348 aaPredicted RBP10.79□□□□□ -0.68
SRP54-210ENST00000556380 AGO3Q9H9G7 860 aaKnown RBP10.79□□□□□ -0.68
SRP54-210ENST00000556380 LRWD1Q9UFC0 647 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 TRPV2Q9Y5S1 764 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 CLIC4Q9Y696 253 aa10.79□□□□□ -0.68
SRP54-210ENST00000556380 PP2D1A8MPX8 630 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 BAIAP3O94812 1187 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 BMP15O95972 392 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 GHRP10912 638 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 MUTP22033 750 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 CDC25AP30304 524 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 CLCN3P51790 818 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 TBC1D8BQ0IIM8 1120 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 OTUD6AQ7L8S5 288 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 PIGOQ8TEQ8 1089 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 CEP170P1Q96L14 293 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 USP28Q96RU2 1077 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 SUGCTQ9HAC7 445 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 XPNPEP1Q9NQW7 623 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 DBR1Q9UK59 544 aaKnown RBP10.78□□□□□ -0.68
SRP54-210ENST00000556380 MORC2Q9Y6X9 1032 aaPredicted RBP10.78□□□□□ -0.68
SRP54-210ENST00000556380 TANC1Q9C0D5 1861 aa10.78□□□□□ -0.68
SRP54-210ENST00000556380 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.77□□□□□ -0.69
SRP54-210ENST00000556380 ABHD14A-ACY1A0A1B0GW23 586 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.77□□□□□ -0.69
SRP54-210ENST00000556380 GRXCR1A8MXD5 290 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 VTNP04004 478 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 HSP90AA1P07900 732 aaKnown RBP10.77□□□□□ -0.69
SRP54-210ENST00000556380 ZSCAN22P10073 491 aaPredicted RBP10.77□□□□□ -0.69
SRP54-210ENST00000556380 ACTN1P12814 892 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 TMOD1P28289 359 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 RFC5P40937 340 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 RARRES1P49788 294 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 CRYBB1P53674 252 aaPredicted RBP10.77□□□□□ -0.69
SRP54-210ENST00000556380 NLRP11P59045 1033 aaKnown RBP10.77□□□□□ -0.69
SRP54-210ENST00000556380 SMAD3P84022 425 aaKnown RBP10.77□□□□□ -0.69
SRP54-210ENST00000556380 GRIN1Q05586 938 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 KIZQ2M2Z5 673 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 TMEM266Q2M3C6 531 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 XKR9Q5GH70 373 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 HYIQ5T013 277 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 TSHZ1Q6ZSZ6 1077 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 USP38Q8NB14 1042 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 ERMNQ8TAM6 284 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 PHOSPHO2Q8TCD6 241 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 KCNV2Q8TDN2 545 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 TMEM40Q8WWA1 233 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 SEPT8Q92599 483 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 NACC1Q96RE7 527 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 JPH2Q9BR39 696 aaPredicted RBP10.77□□□□□ -0.69
SRP54-210ENST00000556380 ZDHHC9Q9Y397 364 aa10.77□□□□□ -0.69
SRP54-210ENST00000556380 CHD7Q9P2D1 2997 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 EVPLQ92817 2033 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.76□□□□□ -0.69
SRP54-210ENST00000556380 VWA3AA6NCI4 1184 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 BRD1O95696 1058 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 CD52P31358 61 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 CCT6AP40227 531 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms