RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 WRAP73Q9P2S5 460 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-205ENST00000556310 PADI3Q9ULW8 664 aa12.92□□□□□ -0.34
SLIRP-205ENST00000556310 AKT3Q9Y243 479 aa12.92□□□□□ -0.34
SLIRP-205ENST00000556310 GINS2Q9Y248 185 aa12.92□□□□□ -0.34
SLIRP-205ENST00000556310 IGKV6-21A0A0C4DH24 114 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 POTEMA6NI47 508 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 H3BQV1 296 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 GPR32O75388 356 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 FOSL2P15408 326 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 HTRA4P83105 476 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-205ENST00000556310 CYP4A11Q02928 519 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 ZNF174Q15697 407 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 ODR4Q5SWX8 454 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 FAM117BQ6P1L5 589 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 TMEM40Q8WWA1 233 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 LINC01599Q8WXQ3 324 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 TOP1MTQ969P6 601 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 PPP1R16BQ96T49 567 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 OSMRQ99650 979 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 EIF2AK1Q9BQI3 630 aaKnown RBP12.91□□□□□ -0.34
SLIRP-205ENST00000556310 JPH2Q9BR39 696 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-205ENST00000556310 PRDM12Q9H4Q4 367 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 SUGCTQ9HAC7 445 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 CDHR5Q9HBB8 845 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 ERVK-5Q9HDB9 667 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 CYP26B1Q9NR63 512 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 NOC2LQ9Y3T9 749 aaKnown RBP12.91□□□□□ -0.34
SLIRP-205ENST00000556310 INSL6Q9Y581 213 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
SLIRP-205ENST00000556310 LCHNA4D1U4 455 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 MAFO75444 373 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-205ENST00000556310 RPS6KA5O75582 802 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 SLITRK3O94933 977 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 ARHGEF15O94989 841 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 LYPLA2O95372 231 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 YWHABP31946 246 aaKnown RBP12.9□□□□□ -0.34
SLIRP-205ENST00000556310 RFC5P40937 340 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 DNM2P50570 870 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 GPC3P51654 580 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 NLRP11P59045 1033 aaKnown RBP12.9□□□□□ -0.34
SLIRP-205ENST00000556310 TAP1Q03518 808 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 CTTNQ14247 550 aaKnown RBP12.9□□□□□ -0.34
SLIRP-205ENST00000556310 TMEM266Q2M3C6 531 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 OTUD6AQ7L8S5 288 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 FAM228AQ86W67 206 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 SLC7A3Q8WY07 619 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 CEP170P1Q96L14 293 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-205ENST00000556310 HSD17B14Q9BPX1 270 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 SH2D3AQ9BRG2 576 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 ADAMTS10Q9H324 1103 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 SCUBE2Q9NQ36 999 aa12.9□□□□□ -0.34
SLIRP-205ENST00000556310 DPYSL4O14531 572 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 ENPP3O14638 875 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 GPR182O15218 404 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 GAS2O43903 313 aaKnown RBP12.89□□□□□ -0.35
SLIRP-205ENST00000556310 TOB1P50616 345 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-205ENST00000556310 POLGP54098 1239 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-205ENST00000556310 NPEPPSP55786 919 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 CDC42EP1Q00587 391 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 NFX1Q12986 1120 aaKnown RBP12.89□□□□□ -0.35
SLIRP-205ENST00000556310 DRP2Q13474 957 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 RILPL1Q5EBL4 403 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 TPH2Q8IWU9 490 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 EXOC8Q8IYI6 725 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 SCLT1Q96NL6 688 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 YME1L1Q96TA2 773 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 TMX1Q9H3N1 280 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 DHX33Q9H6R0 707 aaKnown RBP12.89□□□□□ -0.35
SLIRP-205ENST00000556310 KIAA1671Q9BY89 1806 aa12.89□□□□□ -0.35
SLIRP-205ENST00000556310 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 K7ELQ4 463 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-205ENST00000556310 LAD1O00515 517 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 UPP2O95045 317 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 DARSP14868 501 aaKnown RBP12.88□□□□□ -0.35
SLIRP-205ENST00000556310 EIF4BP23588 611 aaKnown RBP12.88□□□□□ -0.35
SLIRP-205ENST00000556310 XKR9Q5GH70 373 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 LARP1BQ659C4 914 aaKnown RBP12.88□□□□□ -0.35
SLIRP-205ENST00000556310 MAMSTRQ6ZN01 415 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 ZNF410Q86VK4 478 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 NPAS4Q8IUM7 802 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 C4orf32Q8N8J7 132 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 MAFAQ8NHW3 353 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-205ENST00000556310 ERMNQ8TAM6 284 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 NLRP7Q8WX94 980 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 RC3H2Q9HBD1 1191 aaKnown RBP12.88□□□□□ -0.35
SLIRP-205ENST00000556310 TUFT1Q9NNX1 390 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.88□□□□□ -0.35
SLIRP-205ENST00000556310 ANKEF1Q9NU02 776 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 SUCLA2Q9P2R7 463 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-205ENST00000556310 ST3GAL5Q9UNP4 418 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 PCDHB6Q9Y5E3 794 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 ADGRA3Q8IWK6 1321 aa12.88□□□□□ -0.35
SLIRP-205ENST00000556310 FNDC1Q4ZHG4 1894 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-205ENST00000556310 MGEA5O60502 916 aa12.87□□□□□ -0.35
SLIRP-205ENST00000556310 SPATA31C1P0DKV0 1188 aa12.87□□□□□ -0.35
SLIRP-205ENST00000556310 PDCP20941 246 aa12.87□□□□□ -0.35
SLIRP-205ENST00000556310 TECP42680 631 aa12.87□□□□□ -0.35
SLIRP-205ENST00000556310 ERVK-21P61565 698 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms