RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 ZAR1LA6NP61 321 aa5.48□□□□□ -1.53
SCFD1-218ENST00000556256 GOLGA8BA8MQT2 603 aa5.48□□□□□ -1.53
SCFD1-218ENST00000556256 C6orf222P0C671 652 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-218ENST00000556256 ARID5AQ03989 594 aa5.48□□□□□ -1.53
SCFD1-218ENST00000556256 COLEC12Q5KU26 742 aa5.48□□□□□ -1.53
SCFD1-218ENST00000556256 LY6G5CQ5SRR4 150 aa5.48□□□□□ -1.53
SCFD1-218ENST00000556256 HTR3DQ70Z44 454 aa5.48□□□□□ -1.53
SCFD1-218ENST00000556256 ZC3H7AQ8IWR0 971 aaKnown RBP5.48□□□□□ -1.53
SCFD1-218ENST00000556256 ELOA2Q8IYF1 753 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-218ENST00000556256 SYNE4Q8N205 404 aa5.48□□□□□ -1.53
SCFD1-218ENST00000556256 THAP3Q8WTV1 239 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-218ENST00000556256 GFM2Q969S9 779 aaKnown RBP5.48□□□□□ -1.53
SCFD1-218ENST00000556256 PGBD4Q96DM1 585 aa5.48□□□□□ -1.53
SCFD1-218ENST00000556256 BBC3Q96PG8 261 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-218ENST00000556256 TCF25Q9BQ70 676 aa5.48□□□□□ -1.53
SCFD1-218ENST00000556256 SPATA9Q9BWV2 254 aa5.48□□□□□ -1.53
SCFD1-218ENST00000556256 GRID2IPA4D2P6 1211 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 UNCXA6NJT0 531 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 GRXCR1A8MXD5 290 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 ITGB1P05556 798 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 NAT1P18440 290 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 ERCC5P28715 1186 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-218ENST00000556256 KRTAP10-11P60412 298 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 TCIRG1Q13488 830 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 FAM209AQ5JX71 171 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 FKBP15Q5T1M5 1219 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 C1QL3Q5VWW1 255 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 ADGRG3Q86Y34 549 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 ATXN2LQ8WWM7 1075 aaKnown RBP5.47□□□□□ -1.53
SCFD1-218ENST00000556256 IL23AQ9NPF7 189 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 SAE1Q9UBE0 346 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-218ENST00000556256 DENND2AQ9ULE3 1009 aa5.47□□□□□ -1.53
SCFD1-218ENST00000556256 GOLGA6L6A8MZA4 724 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 ADCY3O60266 1144 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 CRTAMO95727 393 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 ABHD16AO95870 558 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 ANTXR2P58335 489 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 CATSPEREQ5SY80 951 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 FOXB2Q5VYV0 432 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 SYCE2Q6PIF2 218 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 OLFML1Q6UWY5 402 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 CISD2Q8N5K1 135 aaKnown RBP5.46□□□□□ -1.54
SCFD1-218ENST00000556256 DLG3Q92796 817 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 ZNF669Q96BR6 464 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-218ENST00000556256 CDC6Q99741 560 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 SYNPO2LQ9H987 977 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 B3GALT1Q9Y5Z6 326 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 HS3ST4Q9Y661 456 aa5.46□□□□□ -1.54
SCFD1-218ENST00000556256 TRBV23-1A0A0A0MS06 115 aa5.45□□□□□ -1.54
SCFD1-218ENST00000556256 ZNF37AP17032 561 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-218ENST00000556256 SDHAP31040 664 aa5.45□□□□□ -1.54
SCFD1-218ENST00000556256 SUMO1P63165 101 aaKnown RBP5.45□□□□□ -1.54
SCFD1-218ENST00000556256 TMEM132BQ14DG7 1078 aa5.45□□□□□ -1.54
SCFD1-218ENST00000556256 SPATC1Q76KD6 591 aa5.45□□□□□ -1.54
SCFD1-218ENST00000556256 ERCC4Q92889 916 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-218ENST00000556256 FOXRED1Q96CU9 486 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-218ENST00000556256 TOR3AQ9H497 397 aa5.45□□□□□ -1.54
SCFD1-218ENST00000556256 B3GALT2O43825 422 aa5.44□□□□□ -1.54
SCFD1-218ENST00000556256 MFAP3LO75121 409 aa5.44□□□□□ -1.54
SCFD1-218ENST00000556256 GABREP78334 506 aa5.44□□□□□ -1.54
SCFD1-218ENST00000556256 ALDH6A1Q02252 535 aaKnown RBP5.44□□□□□ -1.54
SCFD1-218ENST00000556256 GAGE13Q4V321 117 aa5.44□□□□□ -1.54
SCFD1-218ENST00000556256 HECTD2Q5U5R9 776 aa5.44□□□□□ -1.54
SCFD1-218ENST00000556256 MFSD5Q6N075 450 aa5.44□□□□□ -1.54
SCFD1-218ENST00000556256 KCNV1Q6PIU1 500 aa5.44□□□□□ -1.54
SCFD1-218ENST00000556256 MB21D1Q8N884 522 aa5.44□□□□□ -1.54
SCFD1-218ENST00000556256 MDGA1Q8NFP4 955 aa5.44□□□□□ -1.54
SCFD1-218ENST00000556256 NKD2Q969F2 451 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-218ENST00000556256 KIAA0355O15063 1070 aa5.43□□□□□ -1.54
SCFD1-218ENST00000556256 CD38P28907 300 aa5.43□□□□□ -1.54
SCFD1-218ENST00000556256 STRIP1Q5VSL9 837 aa5.43□□□□□ -1.54
SCFD1-218ENST00000556256 NAIF1Q69YI7 327 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-218ENST00000556256 LRRC55Q6ZSA7 311 aa5.43□□□□□ -1.54
SCFD1-218ENST00000556256 RTN4RL1Q86UN2 441 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-218ENST00000556256 BEND2Q8NDZ0 799 aa5.43□□□□□ -1.54
SCFD1-218ENST00000556256 ZNF512Q96ME7 567 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-218ENST00000556256 RCAN3Q9UKA8 241 aa5.43□□□□□ -1.54
SCFD1-218ENST00000556256 COQ6Q9Y2Z9 468 aa5.43□□□□□ -1.54
SCFD1-218ENST00000556256 TOX4O94842 621 aa5.42□□□□□ -1.54
SCFD1-218ENST00000556256 RASGRP1O95267 797 aa5.42□□□□□ -1.54
SCFD1-218ENST00000556256 VSIG10L2P0DP72 767 aa5.42□□□□□ -1.54
SCFD1-218ENST00000556256 ZFP36P26651 326 aaKnown RBP5.42□□□□□ -1.54
SCFD1-218ENST00000556256 CLK3P49761 638 aaKnown RBP5.42□□□□□ -1.54
SCFD1-218ENST00000556256 RAB33AQ14088 237 aa5.42□□□□□ -1.54
SCFD1-218ENST00000556256 CLEC14AQ86T13 490 aa5.42□□□□□ -1.54
SCFD1-218ENST00000556256 ZBTB38Q8NAP3 1195 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-218ENST00000556256 PLA2G15Q8NCC3 412 aa5.42□□□□□ -1.54
SCFD1-218ENST00000556256 CPT1CQ8TCG5 803 aa5.42□□□□□ -1.54
SCFD1-218ENST00000556256 IPO9Q96P70 1041 aaKnown RBP5.42□□□□□ -1.54
SCFD1-218ENST00000556256 FOXB1Q99853 325 aa5.42□□□□□ -1.54
SCFD1-218ENST00000556256 SORCS3Q9UPU3 1222 aa5.42□□□□□ -1.54
SCFD1-218ENST00000556256 PPFIA4O75335 1185 aa5.41□□□□□ -1.54
SCFD1-218ENST00000556256 IPO13O94829 963 aaKnown RBP5.41□□□□□ -1.54
SCFD1-218ENST00000556256 DGKDQ16760 1214 aa5.41□□□□□ -1.54
SCFD1-218ENST00000556256 NBPF6Q5VWK0 638 aa5.41□□□□□ -1.54
SCFD1-218ENST00000556256 CXorf67Q86X51 503 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-218ENST00000556256 OR5AN1Q8NGI8 311 aa5.41□□□□□ -1.54
SCFD1-218ENST00000556256 ST8SIA2Q92186 375 aa5.41□□□□□ -1.54
SCFD1-218ENST00000556256 NBPF4Q96M43 638 aa5.41□□□□□ -1.54
SCFD1-218ENST00000556256 TINF2Q9BSI4 451 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms