RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 NCAPH2Q6IBW4 605 aa18.17■□□□□ 0.5
CHGA-204ENST00000556076 PPP4R3AQ6IN85 833 aa18.17■□□□□ 0.5
CHGA-204ENST00000556076 EP400NLQ6ZTU2 488 aa18.17■□□□□ 0.5
CHGA-204ENST00000556076 CCDC83Q8IWF9 413 aa18.17■□□□□ 0.5
CHGA-204ENST00000556076 CMTR2Q8IYT2 770 aaKnown RBP18.17■□□□□ 0.5
CHGA-204ENST00000556076 NLRP7Q8WX94 980 aa18.17■□□□□ 0.5
CHGA-204ENST00000556076 KIF2CQ99661 725 aa18.17■□□□□ 0.5
CHGA-204ENST00000556076 NIFKQ9BYG3 293 aaKnown RBP18.17■□□□□ 0.5
CHGA-204ENST00000556076 PCDHB7Q9Y5E2 793 aa18.17■□□□□ 0.5
CHGA-204ENST00000556076 MMP1P03956 469 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 ITGB1P05556 798 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 EIF4BP23588 611 aaKnown RBP18.16■□□□□ 0.5
CHGA-204ENST00000556076 TMOD1P28289 359 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 CYP4A11Q02928 519 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 AAK1Q2M2I8 961 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 SLC24A5Q71RS6 500 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 DIS3L2Q8IYB7 885 aaKnown RBP18.16■□□□□ 0.5
CHGA-204ENST00000556076 KLHL23Q8NBE8 558 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 RNF169Q8NCN4 708 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 WASF1Q92558 559 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 DYDC2Q96IM9 177 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 C11orf84Q9BUA3 381 aaPredicted RBP18.16■□□□□ 0.5
CHGA-204ENST00000556076 RNF19AQ9NV58 838 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 PLAGL2Q9UPG8 496 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 ARID2Q68CP9 1835 aa18.16■□□□□ 0.5
CHGA-204ENST00000556076 A0A087WWV3 80 aa18.15■□□□□ 0.5
CHGA-204ENST00000556076 A0A087WZ62 844 aa18.15■□□□□ 0.5
CHGA-204ENST00000556076 MARCH6O60337 910 aa18.15■□□□□ 0.5
CHGA-204ENST00000556076 DARSP14868 501 aaKnown RBP18.15■□□□□ 0.5
CHGA-204ENST00000556076 GCFC2P16383 781 aaKnown RBP18.15■□□□□ 0.5
CHGA-204ENST00000556076 IRS1P35568 1242 aa18.15■□□□□ 0.5
CHGA-204ENST00000556076 PSMC5P62195 406 aa18.15■□□□□ 0.5
CHGA-204ENST00000556076 SPIRE1Q08AE8 756 aa18.15■□□□□ 0.5
CHGA-204ENST00000556076 HYAL1Q12794 435 aa18.15■□□□□ 0.5
CHGA-204ENST00000556076 CTTNQ14247 550 aaKnown RBP18.15■□□□□ 0.5
CHGA-204ENST00000556076 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.15■□□□□ 0.5
CHGA-204ENST00000556076 FAM20AQ96MK3 541 aa18.15■□□□□ 0.5
CHGA-204ENST00000556076 FDXACB1Q9BRP7 624 aaPredicted RBP18.15■□□□□ 0.5
CHGA-204ENST00000556076 NSUN3Q9H649 340 aaKnown RBP18.15■□□□□ 0.5
CHGA-204ENST00000556076 IGKV6-21A0A0C4DH24 114 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 LINC01565O15544 149 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 RB1P06400 928 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 ATP2B1P20020 1258 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 PBX3P40426 434 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 QARSP47897 775 aaKnown RBP18.14■□□□□ 0.49
CHGA-204ENST00000556076 FAM189BP81408 668 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 LONRF3Q496Y0 759 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 TIGD5Q53EQ6 642 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 ADGRD2Q7Z7M1 963 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 RHPN2Q8IUC4 686 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 SPPL3Q8TCT6 385 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 LXNQ9BS40 222 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 IGFLR1Q9H665 355 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 CD320Q9NPF0 282 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 CYP26B1Q9NR63 512 aa18.14■□□□□ 0.49
CHGA-204ENST00000556076 SUCLA2Q9P2R7 463 aaPredicted RBP18.14■□□□□ 0.49
CHGA-204ENST00000556076 MAFO75444 373 aaPredicted RBP18.13■□□□□ 0.49
CHGA-204ENST00000556076 DLX2Q07687 328 aaPredicted RBP18.13■□□□□ 0.49
CHGA-204ENST00000556076 CLUL1Q15846 466 aa18.13■□□□□ 0.49
CHGA-204ENST00000556076 SPOUT1Q5T280 376 aaKnown RBP18.13■□□□□ 0.49
CHGA-204ENST00000556076 KHSRPQ92945 711 aaKnown RBP eCLIP18.13■□□□□ 0.49
CHGA-204ENST00000556076 TMEM143Q96AN5 459 aa18.13■□□□□ 0.49
CHGA-204ENST00000556076 NLRP4Q96MN2 994 aa18.13■□□□□ 0.49
CHGA-204ENST00000556076 ATP6V0A4Q9HBG4 840 aa18.13■□□□□ 0.49
CHGA-204ENST00000556076 BRMS1Q9HCU9 246 aa18.13■□□□□ 0.49
CHGA-204ENST00000556076 C1orf112Q9NSG2 853 aa18.13■□□□□ 0.49
CHGA-204ENST00000556076 TYW1Q9NV66 732 aaKnown RBP18.13■□□□□ 0.49
CHGA-204ENST00000556076 TMEM161AQ9NX61 479 aa18.13■□□□□ 0.49
CHGA-204ENST00000556076 CLDND1Q9NY35 253 aa18.13■□□□□ 0.49
CHGA-204ENST00000556076 LIMCH1Q9UPQ0 1083 aa18.13■□□□□ 0.49
CHGA-204ENST00000556076 P4HBP07237 508 aaKnown RBP18.12■□□□□ 0.49
CHGA-204ENST00000556076 IL9P15248 144 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 ATF7P17544 494 aaPredicted RBP18.12■□□□□ 0.49
CHGA-204ENST00000556076 LTBRP36941 435 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 EPHA7Q15375 998 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 CLLU1OSQ5K130 101 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 ODR4Q5SWX8 454 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 LRRC55Q6ZSA7 311 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 ECHDC2Q86YB7 292 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 CEP170P1Q96L14 293 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 CASD1Q96PB1 797 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 PLVAPQ9BX97 442 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 TMEM60Q9H2L4 133 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 CWH43Q9H720 699 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 RWDD3Q9Y3V2 267 aa18.12■□□□□ 0.49
CHGA-204ENST00000556076 TBX3O15119 743 aa18.11■□□□□ 0.49
CHGA-204ENST00000556076 TXKP42681 527 aa18.11■□□□□ 0.49
CHGA-204ENST00000556076 TRIM29Q14134 588 aa18.11■□□□□ 0.49
CHGA-204ENST00000556076 CALCRLQ16602 461 aa18.11■□□□□ 0.49
CHGA-204ENST00000556076 LEXMQ3ZCV2 418 aa18.11■□□□□ 0.49
CHGA-204ENST00000556076 TPH2Q8IWU9 490 aa18.11■□□□□ 0.49
CHGA-204ENST00000556076 COLGALT1Q8NBJ5 622 aa18.11■□□□□ 0.49
CHGA-204ENST00000556076 POF1BQ8WVV4 589 aa18.11■□□□□ 0.49
CHGA-204ENST00000556076 LPPQ93052 612 aa18.11■□□□□ 0.49
CHGA-204ENST00000556076 MEIS3P2A8K0S8 358 aa18.1■□□□□ 0.49
CHGA-204ENST00000556076 SLITRK3O94933 977 aa18.1■□□□□ 0.49
CHGA-204ENST00000556076 SRGAP2CP0DJJ0 459 aa18.1■□□□□ 0.49
CHGA-204ENST00000556076 ZSCAN20P17040 1043 aaPredicted RBP18.1■□□□□ 0.49
CHGA-204ENST00000556076 YWHABP31946 246 aaKnown RBP18.1■□□□□ 0.49
CHGA-204ENST00000556076 MCM7P33993 719 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms